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ACD65_98

Alias: ACD65_441029.6283.5

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_98_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(3..344)
DNA (342bp) protein (114aa)
DNA topoisomerase I (EC:5.99.1.2)
Prokaryotic type I DNA topoisomerase (db=superfamily db_id=SSF56712 from=1 to=89 evalue=4.3e-17 interpro_id=IPR000380 interpro_description=DNA topoisomerase, type IA, core GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
zf-C4_Topoisom (db=HMMPfam db_id=PF01396 from=76 to=112 evalue=9.9e-15 interpro_id=IPR013498 interpro_description=DNA topoisomerase, type IA, zn finger GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
no description (db=Gene3D db_id=G3DSA:1.10.460.10 from=1 to=75 evalue=1.1e-14 interpro_id=IPR013824 interpro_description=DNA topoisomerase, type IA, central region, subdomain 1 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265), Biological Process: DNA unwinding involved in replication (GO:0006268))
ACD65_98_2
ACD65, ACD65, ACD65, ACD65, Peregrinibacteria, Bacteria

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448..1131
DNA (684bp) protein (228aa)
seg (db=Seg db_id=seg from=32 to=43)
ACD65_98_3

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1642..2028
DNA (387bp) protein (129aa)
coiled-coil (db=Coil db_id=coil from=96 to=117 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD47793.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_98_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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2322..2597
DNA (276bp) protein (92aa)
hup; DNA-binding protein HU
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=1.1e-30 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=90 evalue=1.3e-28 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
IHF-like DNA-binding proteins (db=superfamily db_id=SSF47729 from=1 to=91 evalue=1.3e-24 interpro_id=IPR010992 interpro_description=IHF-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD65_98_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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2734..3777
DNA (1044bp) protein (348aa)
Phenylalanyl-tRNA synthetase, alpha subunit n=2 Tax=Clostridium RepID=B8I1X0_CLOCE (db=UNIREF evalue=2.0e-104 bit_score=382.0 identity=53.27 coverage=94.2528735632184)
pheS; phenylalanyl-tRNA synthetase subunit alpha
pheS; phenylalanyl-tRNA synthetase subunit alpha
seg (db=Seg db_id=seg from=79 to=92)
ACD65_98_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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3797..6199
DNA (2403bp) protein (801aa)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, beta subunit n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PW09_9CLOT (db=UNIREF evalue=3.0e-135 bit_score=486.0 identity=37.11 coverage=97.8776529338327)
pheT_bact: phenylalanyl-tRNA synthetase, be (db=HMMTigr db_id=TIGR00472 from=1 to=798 evalue=1.5e-243 interpro_id=IPR004532 interpro_description=Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: phenylalanyl-tRNA
Displaying 6 items

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