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ACD65_120

Alias: ACD65_30289.19852.10

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_120_1

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comp(3..1940)
DNA (1938bp) protein (646aa)
ppa; membrane-bound H(+)-translocating inorganic pyrophosphatase, vacuolar-type (EC:3.6.1.1)
ppa; membrane-bound H(+)-translocating inorganic pyrophosphatase, vacuolar-type (EC:3.6.1.1)
Pyrophosphate-energized proton pump / Pyrophosphate-energized inorganic pyrophosphatase n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12X92_METBU (db=UNIREF evalue=3.0e-180 bit_score=635.0 identity=62.14 coverage=93.1888544891641)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
ACD65_120_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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2028..2945
DNA (918bp) protein (306aa)
pantothenate kinase
seg (db=Seg db_id=seg from=152 to=165)
seg (db=Seg db_id=seg from=183 to=202)
Fumble (db=HMMPfam db_id=PF03630 from=53 to=268 evalue=4.9e-25 interpro_id=IPR011602 interpro_description=Fumble GO=Molecular Function: pantothenate kinase activity (GO:0004594), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
ACD65_120_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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2979..3593
DNA (615bp) protein (205aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=151)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
ACD65_120_4
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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3668..4414
DNA (747bp) protein (249aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
seg (db=Seg db_id=seg from=65 to=77)
coiled-coil (db=Coil db_id=coil from=215 to=236 evalue=NA)
3-methyl-2-oxobutanoate hydroxymethyltransferase (db=HMMPIR db_id=PIRSF000388 from=1 to=247 evalue=1.0e-102 interpro_id=IPR003700 interpro_description=Ketopantoate hydroxymethyltransferase GO=Molecular Function: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity (GO:0003864), Biological Process: pantothenate biosynthetic process (GO:0015940))
ACD65_120_5
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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4371..5219
DNA (849bp) protein (283aa)
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
PANTOATE-BETA-ALANINE LIGASE (db=HMMPanther db_id=PTHR21299:SF1 from=18 to=281 evalue=4.9e-104 interpro_id=IPR003721 interpro_description=Pantoate-beta-alanine ligase GO=Molecular Function: pantoate-beta-alanine ligase activity (GO:0004592), Biological Process: pantothenate biosynthetic process (GO:0015940))
CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE (db=HMMPanther db_id=PTHR21299 from=18 to=281 evalue=4.9e-104)
panC: pantoate--beta-alanine ligase (db=HMMTigr db_id=TIGR00018 from=16 to=281 evalue=1.6e-101 interpro_id=IPR003721 interpro_description=Pantoate-beta-alanine ligase GO=Molecular Function: pantoate-beta-alanine ligase activity (GO:0004592), Biological Process: pantothenate biosynthetic process (GO:0015940))
ACD65_120_6
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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5216..6409
DNA (1194bp) protein (398aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
seg (db=Seg db_id=seg from=77 to=92)
HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY (db=HMMPanther db_id=PTHR14359 from=14 to=397 evalue=3.9e-120)
ACD65_120_7

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6464..7459
DNA (996bp) protein (332aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
seg (db=Seg db_id=seg from=102 to=122)
seg (db=Seg db_id=seg from=70 to=94)
Uncharacterized protein {ECO:0000313|EMBL:EKD47921.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_120_8

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7698..10112
DNA (2415bp) protein (805aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
seg (db=Seg db_id=seg from=362 to=372)
spoT_relA: RelA/SpoT family protein (db=HMMTigr db_id=TIGR00691 from=32 to=794 evalue=1.2e-152 interpro_id=IPR004811 interpro_description=RelA/SpoT protein GO=Biological Process: guanosine tetraphosphate metabolic process (GO:0015969))
GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE (db=HMMPanther db_id=PTHR21262 from=121 to=797 evalue=2.9e-104)
ACD65_120_9

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10176..12437
DNA (2262bp) protein (754aa)
Negative regulator of beta-lactamase expression n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q093H8_STIAU (db=UNIREF evalue=1.0e-13 bit_score=82.8 identity=40.71 coverage=17.1087533156499)
N-acetylmuramoyl-L-alanine amidase
seg (db=Seg db_id=seg from=294 to=305)
N-acetylmuramoyl-L-alanine amidase-like (db=superfamily db_id=SSF55846 from=545 to=699 evalue=2.4e-25 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
ACD65_120_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(12434..13171)
DNA (738bp) protein (246aa)
DNA recombination and repair protein RecO
reco: DNA repair protein RecO (db=HMMTigr db_id=TIGR00613 from=4 to=243 evalue=5.6e-35 interpro_id=IPR003717 interpro_description=Recombination protein O, RecO GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ArfGap/RecO-like zinc finger (db=superfamily db_id=SSF57863 from=81 to=237 evalue=8.1e-23 interpro_id=IPR001164 interpro_description=Arf GTPase activating protein GO=Molecular Function: ARF GTPase activator activity (GO:0008060), Molecular Function: zinc ion binding (GO:0008270), Biological Process: regulation of ARF GTPase activity (GO:0032312))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=79 evalue=6.0e-15 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD65_120_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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comp(13207..14118)
DNA (912bp) protein (304aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=236 to=258)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
ACD65_120_12
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14070..14519)
DNA (450bp) protein (150aa)
cytidyltransferase
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=1 to=134 evalue=4.2e-24 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=135 evalue=6.8e-21)
cyt_tran_rel: cytidyltransferase-related (db=HMMTigr db_id=TIGR00125 from=3 to=69 evalue=9.7e-15 interpro_id=IPR004821 interpro_description=Cytidyltransferase-related GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058))
ACD65_120_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(14574..14882)
DNA (309bp) protein (103aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=98)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
seg (db=Seg db_id=seg from=77 to=95)
ACD65_120_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

15013..16740
DNA (1728bp) protein (576aa)
seg (db=Seg db_id=seg from=268 to=277)
seg (db=Seg db_id=seg from=472 to=486)
seg 268..277 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_120_15
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

17491..18216
DNA (726bp) protein (242aa)
seg (db=Seg db_id=seg from=176 to=190)
seg 176..190 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
ACD65_120_16

Not on your lists

18461..18565
DNA (105bp) protein (35aa)
seg (db=Seg db_id=seg from=28 to=33)
Uncharacterized protein {ECO:0000313|EMBL:EKD47912.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_120_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

18846..19889
DNA (1044bp) protein (348aa)
glutamyl-tRNA(Gln) amidotransferase subunit A
glutamyl-tRNA(Gln) amidotransferase subunit A
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=GATA_SYNFM (db=UNIREF evalue=3.0e-102 bit_score=375.0 identity=60.58 coverage=98.5632183908046)
seg (db=Seg db_id=seg from=182 to=195)
Displaying 17 items

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