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ACD65_132

Alias: ACD65_144748.2433.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_132_1

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comp(3..164)
DNA (162bp) protein (54aa)
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=2 to=47 evalue=4.1e-08 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
Uncharacterized protein {ECO:0000313|EMBL:EKD48215.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_132_2

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412..1158
DNA (747bp) protein (249aa)
prophage antirepressor
coiled-coil (db=Coil db_id=coil from=167 to=188 evalue=NA)
coiled-coil (db=Coil db_id=coil from=222 to=243 evalue=NA)
seg (db=Seg db_id=seg from=157 to=170)
ACD65_132_3

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comp(1150..1521)
DNA (372bp) protein (124aa)
RNA-directed DNA polymerase
Retron-type reverse transcriptase n=2 Tax=Clostridiales RepID=C9LCL4_RUMHA (db=UNIREF evalue=4.0e-09 bit_score=63.9 identity=44.29 coverage=54.8387096774194)
seg (db=Seg db_id=seg from=76 to=97)
RVT_1 (db=HMMPfam db_id=PF00078 from=11 to=70 evalue=5.0e-08 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
ACD65_132_4

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comp(1620..2282)
DNA (663bp) protein (221aa)
pyrE; orotate phosphoribosyltransferase
Orotate phosphoribosyltransferase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J3D9_9BACL (db=UNIREF evalue=1.0e-43 bit_score=179.0 identity=49.29 coverage=92.3076923076923)
seg (db=Seg db_id=seg from=77 to=91)
PRTase-like (db=superfamily db_id=SSF53271 from=2 to=215 evalue=2.0e-46)
could be distant to adenine phosphoribosyltransferase, which converts PRPP to AMP in rubisco Archaea 3. This enzyme converts PRPP to OMP. kelly wrighton (11/16/12)
ACD65_132_5

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comp(2320..2466)
DNA (147bp) protein (49aa)
2320..2466 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD48214.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

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