ggKbase home page

ACD65_55_5

Organism: PER_ACD65

partial RP 37 / 55 MC: 17 BSCG 37 / 51 MC: 13 ASCG 0 / 38
Location: 6135..6875

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Ruminococcus sp. 18P13 RepID=D4LCY4_9FIRM (db=UNIREF evalue=6.0e-51 bit_score=204.0 identity=45.89 coverage=91.497975708502) similarity UNIREF
DB: UNIREF
  • Identity: 45.89
  • Coverage: 91.5
  • Bit_score: 204
  • Evalue 6.00e-51
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.- 5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 234.0
  • Bit_score: 201
  • Evalue 3.40e-49
PSI_RSU (db=PatternScan db_id=PS01149 from=105 to=119 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

PER_GWF2_43_17 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 741
TTGGCCACAATAAATACGCCCGAAAGAATTCAAAAACTCATCGCAAACGCGGGATACTGCTCGCGACGTAAAGCCGAAGAATTAATCTCTGCTGGCAAAGTTTTCATAAATGCCAAAAAAGCCAAGCTTGGCGATAAGGCAAACGACGTTTCGGAAATAACAGTCGACGGAAATCACATTGCGAAACAAGAACACCACATCTATATCGCCCTCTACAAACCAAAAGGATATATATCAACAACCAGCGACCCTGAAAAAAGACAAACCGTCCTCGACCTACTACCGAAAGAATTACAAAAAGTAAAACCCGCCGGCAGACTCGACGAAAATTCGGAAGGACTGATGATCCTTTCAACCGACGGAGAATTTATAAACATACTCACCCACCCAAAACACCATCACGAAAAAACATACAAAGTTTCACTCAAAGGCGAAGTCTCCGACGAGACTCTTAATAAATTAATATCCGGCACCATCTCGCTCGACGGCAAAATTCTCAACAAAATGCCATACAAATTGAACGAACGCACAAAAGATTACACTCGCATCGACATCACTCTCACCGAAGGCCGCAAAAGACAAATACGCGAAGTTTTTAAACTTCTCAAAACTTACGTGGTACACTTGCGCAGAATGAAAATCGGTCCAATCGAACTCGGCACACTCCGAAAAGGTCAATTCAGGCATCTCACAAAAACAGAAATAGATACGATTTTTGCAAATTTTCATCGTATCAGATAG
PROTEIN sequence
Length: 247
LATINTPERIQKLIANAGYCSRRKAEELISAGKVFINAKKAKLGDKANDVSEITVDGNHIAKQEHHIYIALYKPKGYISTTSDPEKRQTVLDLLPKELQKVKPAGRLDENSEGLMILSTDGEFINILTHPKHHHEKTYKVSLKGEVSDETLNKLISGTISLDGKILNKMPYKLNERTKDYTRIDITLTEGRKRQIREVFKLLKTYVVHLRRMKIGPIELGTLRKGQFRHLTKTEIDTIFANFHRIR*