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ACD65_55

Alias: ACD65_67356.8385.6

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD65_55_1
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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comp(1..1278)
DNA (1278bp) protein (426aa)
comEC; DNA internalization competence protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=398 to=420)
transmembrane_regions (db=TMHMM db_id=tmhmm from=361 to=383)
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=341)
ACD65_55_2

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comp(1322..4255)
DNA (2934bp) protein (978aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=269 to=290 evalue=NA)
seg (db=Seg db_id=seg from=646 to=667)
Uncharacterized protein {ECO:0000313|EMBL:EKD47670.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD65_55_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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comp(4260..4568)
DNA (309bp) protein (103aa)
4260..4568 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:KKT02416.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
ACD65_55_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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4675..6147
DNA (1473bp) protein (491aa)
cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=172 to=182)
seg (db=Seg db_id=seg from=151 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=49)
ACD65_55_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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6135..6875
DNA (741bp) protein (247aa)
Pseudouridine synthase n=1 Tax=Ruminococcus sp. 18P13 RepID=D4LCY4_9FIRM (db=UNIREF evalue=6.0e-51 bit_score=204.0 identity=45.89 coverage=91.497975708502)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.- 5.4.99.12)
PSI_RSU (db=PatternScan db_id=PS01149 from=105 to=119 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866))
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=12 to=245 evalue=4.8e-63)
ACD65_55_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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6969..7862
DNA (894bp) protein (298aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W4N4_DESAS (db=UNIREF evalue=6.0e-39 bit_score=164.0 identity=40.31 coverage=84.5637583892617)
seg (db=Seg db_id=seg from=244 to=255)
seg (db=Seg db_id=seg from=2 to=17)
ACD65_55_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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7907..8419
DNA (513bp) protein (171aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5A7_SPHTD (db=UNIREF evalue=1.0e-10 bit_score=69.3 identity=33.8 coverage=70.1754385964912)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
Displaying 7 items

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