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ACD66_11

Alias: ACD66_188748.6380.6

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_11_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(99..716)
DNA (618bp) protein (206aa)
Transposase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KE89_9GAMM (db=UNIREF evalue=4.0e-25 bit_score=117.0 identity=35.38 coverage=91.747572815534)
hypothetical protein
Transposase IS200-like (db=superfamily db_id=SSF143422 from=12 to=127 evalue=1.2e-16)
Transposase_17 (db=HMMPfam db_id=PF01797 from=12 to=124 evalue=5.8e-10 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
ACD66_11_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(961..1419)
DNA (459bp) protein (153aa)
seg (db=Seg db_id=seg from=12 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=127 evalue=2.2e-06)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=7 to=30 evalue=0.015 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD66_11_3

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1782..1931
DNA (150bp) protein (50aa)
seg (db=Seg db_id=seg from=34 to=43)
Uncharacterized protein {ECO:0000313|EMBL:EKD47427.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD66_11_4
GWF2_OD1_41_40, Uhrbacteria, Parcubacteria, Bacteria

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2964..3743
DNA (780bp) protein (260aa)
Replicative DNA helicase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSV0_9BACT (db=UNIREF evalue=1.0e-59 bit_score=233.0 identity=47.37 coverage=87.3076923076923)
Replicative DNA helicase
seg (db=Seg db_id=seg from=236 to=247)
N-terminal domain of DnaB helicase (db=superfamily db_id=SSF48024 from=6 to=119 evalue=1.9e-32 interpro_id=IPR007693 interpro_description=DNA helicase, DnaB-like, N-terminal GO=Molecular Function: DNA helicase activity (GO:0003678), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260))
ACD66_11_5
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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3713..4441
DNA (729bp) protein (243aa)
replicative DNA helicase
DnaB_C (db=HMMPfam db_id=PF03796 from=1 to=129 evalue=2.0e-43 interpro_id=IPR007694 interpro_description=DNA helicase, DnaB-like, C-terminal GO=Molecular Function: DNA helicase activity (GO:0003678), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=201 evalue=2.2e-43)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=201 evalue=8.4e-29)
ACD66_11_6
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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4567..4851
DNA (285bp) protein (95aa)
DUF149 (db=HMMPfam db_id=PF02575 from=6 to=85 evalue=1.7e-13 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
YbaB-like (db=superfamily db_id=SSF82607 from=1 to=87 evalue=1.1e-12 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
no description (db=Gene3D db_id=G3DSA:3.30.1310.10 from=1 to=86 evalue=9.6e-07 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
Uncharacterized protein {ECO:0000313|EMBL:KKS17750.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_11_7
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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4869..5135
DNA (267bp) protein (89aa)
4869..5135 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKS17751.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_11_8
GWF2_OD1_41_40, Uhrbacteria, Parcubacteria, Bacteria

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5304..5711
DNA (408bp) protein (136aa)
Recombination protein RecR n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9P1_9ACTN (db=UNIREF evalue=2.0e-22 bit_score=108.0 identity=51.4 coverage=77.2058823529412)
DNA replication and repair protein RecR
seg (db=Seg db_id=seg from=115 to=123)
Recombination protein RecR (db=superfamily db_id=SSF111304 from=1 to=113 evalue=1.1e-27 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD66_11_9
GWF2_OD1_41_430, Uhrbacteria, Parcubacteria, Bacteria

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5686..5826
DNA (141bp) protein (47aa)
recR; recombination protein RecR
Recombination protein RecR (db=superfamily db_id=SSF111304 from=1 to=46 evalue=4.2e-12 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR; recombination protein RecR; K06187 recombination protein RecR alias=ACD66_C00011G00009,ACD66_188748.6380.6G0009,ACD66_188748.6380.6_9 id=98834 tax=ACD66 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc=OD1
Recombination protein RecR {ECO:0000313|EMBL:KKS10331.1}; TaxID=1618999 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_41_430.;"
ACD66_11_10

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comp(5874..6251)
DNA (378bp) protein (126aa)
50S ribosomal protein L21
seg (db=Seg db_id=seg from=90 to=102)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=23 to=124 evalue=3.1e-45 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=22 to=118 evalue=1.4e-35 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 10 items

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