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ACD66_45

Alias: ACD66_265529.3535.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_45_1
GWC2_OD1_40_450, Uhrbacteria, Parcubacteria, Bacteria

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comp(3..602)
DNA (600bp) protein (200aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Wzz (db=HMMPfam db_id=PF02706 from=15 to=143 evalue=1.3e-09 interpro_id=IPR003856 interpro_description=Lipopolysaccharide biosynthesis GO=Biological Process: lipopolysaccharide biosynthetic process (GO:0009103), Cellular Component: membrane (GO:0016020))
Uncharacterized protein {ECO:0000313|EMBL:KKR63935.1}; TaxID=1618984 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_40_450.;"
ACD66_45_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(838..1839)
DNA (1002bp) protein (334aa)
serine protease Do (EC:3.4.21.-); K04771 serine protease Do [EC:3.4.21.107] (db=KEGG evalue=4.0e-09 bit_score=65.9 identity=27.27 coverage=47.3053892215569)
seg (db=Seg db_id=seg from=301 to=314)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
Trypsin-like serine proteases (db=superfamily db_id=SSF50494 from=54 to=260 evalue=1.9e-11 interpro_id=IPR009003 interpro_description=Serine/cysteine peptidase, trypsin-like GO=Molecular Function: catalytic activity (GO:0003824))
ACD66_45_3
GWF2_OD1_41_40, Uhrbacteria, Parcubacteria, Bacteria

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comp(1850..2614)
DNA (765bp) protein (255aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=198 to=220)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=251)
seg (db=Seg db_id=seg from=56 to=79)
seg (db=Seg db_id=seg from=115 to=135)
ACD66_45_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(2624..2986)
DNA (363bp) protein (121aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:KKS18185.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_45_5
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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3039..3497
DNA (459bp) protein (153aa)
ssrA-binding protein
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=3 to=146 evalue=2.8e-48 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=1 to=128 evalue=1.2e-38 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.280.10 from=3 to=125 evalue=9.9e-34 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
ACD66_45_6
unknown

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3505..3567
DNA (63bp) protein (21aa)
3505..3567 + (rbs_motif=TAA rbs_spacer=3bp)
Displaying 6 items

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