ggKbase home page

ACD66_56

Alias: ACD66_469039.5760.6

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_56_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

3..428
DNA (426bp) protein (142aa)
UDP-N-acetylmuramoylalanine/D-glutamate ligase
seg (db=Seg db_id=seg from=35 to=46)
MurD-like peptide ligases, peptide-binding domain (db=superfamily db_id=SSF53244 from=1 to=141 evalue=2.4e-29 interpro_id=IPR004101 interpro_description=Mur ligase, C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058), Molecular Function: ligase activity (GO:0016874))
no description (db=Gene3D db_id=G3DSA:3.90.190.20 from=1 to=141 evalue=3.3e-27 interpro_id=IPR004101 interpro_description=Mur ligase, C-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058), Molecular Function: ligase activity (GO:0016874))
ACD66_56_2

Not on your lists

comp(376..528)
DNA (153bp) protein (51aa)
376..528 - (rbs_motif=TAAT rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD66_56_3
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

641..1780
DNA (1140bp) protein (380aa)
UDP-N-acetylmuramyl-tripeptide synthetase
seg (db=Seg db_id=seg from=263 to=274)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE (db=HMMPanther db_id=PTHR23135:SF4 from=10 to=379 evalue=3.5e-86)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=10 to=379 evalue=3.5e-86)
ACD66_56_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1783..2328
DNA (546bp) protein (182aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=46)
seg (db=Seg db_id=seg from=29 to=52)
seg (db=Seg db_id=seg from=99 to=114)
ACD66_56_5
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2309..2722
DNA (414bp) protein (138aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
coiled-coil (db=Coil db_id=coil from=35 to=63 evalue=NA)
seg (db=Seg db_id=seg from=41 to=58)
DivIC (db=HMMPfam db_id=PF04977 from=19 to=94 evalue=4.0e-06 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
ACD66_56_6
GWF2_OD1_41_430, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2832..3587
DNA (756bp) protein (252aa)
FKBP-like (db=superfamily db_id=SSF54534 from=109 to=212 evalue=3.5e-09)
Rotamase (db=HMMPfam db_id=PF00639 from=133 to=210 evalue=3.1e-05 interpro_id=IPR000297 interpro_description=Peptidyl-prolyl cis-trans isomerase, PpiC-type GO=Molecular Function: isomerase activity (GO:0016853))
no description (db=Gene3D db_id=G3DSA:3.10.50.40 from=114 to=212 evalue=4.2e-05)
PPIC_PPIASE_2 (db=ProfileScan db_id=PS50198 from=110 to=212 evalue=9.566 interpro_id=IPR000297 interpro_description=Peptidyl-prolyl cis-trans isomerase, PpiC-type GO=Molecular Function: isomerase activity (GO:0016853))
ACD66_56_7
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

3755..4438
DNA (684bp) protein (228aa)
cell division ATP-binding protein FtsE
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=138 to=152 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
FILAMENTATION TEMPERATURE SENSITIVE CELL DIVISION PROTEIN FTSE (db=HMMPanther db_id=PTHR19222:SF36 from=2 to=223 evalue=3.4e-110)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=223 evalue=3.4e-110)
ACD66_56_8
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4435..5355
DNA (921bp) protein (307aa)
cell division protein
Cell division protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E6B7_9ACTN (db=UNIREF evalue=2.0e-23 bit_score=112.0 identity=30.54 coverage=75.8957654723127)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
seg (db=Seg db_id=seg from=286 to=297)
ACD66_56_9
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

5402..5794
DNA (393bp) protein (131aa)
seg (db=Seg db_id=seg from=34 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
Uncharacterized protein {ECO:0000313|EMBL:KKS18158.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
Displaying 9 items

View Taxonomy