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ACD66_77

Alias: ACD66_14402.3857.18

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_77_1

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comp(59..457)
DNA (399bp) protein (133aa)
59..457 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD47494.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD66_77_2

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comp(460..762)
DNA (303bp) protein (101aa)
mqsR; motility quorum-sensing regulator
mqsR; motility quorum-sensing regulator; K13651 motility quorum-sensing regulator / GCU-specific mRNA interferase toxin alias=ACD66_14402.3857.18G0002,ACD66_14402.3857.18_2,ACD66_C00077G00002 id=99231 tax=ACD66 species=unknown genus=Escherichia taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
Motility quorum-sensing regulator {ECO:0000313|EMBL:EKD47495.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD66_77_3

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1319..1711
DNA (393bp) protein (131aa)
OmpR4; response regulator
CheY-like (db=superfamily db_id=SSF52172 from=1 to=129 evalue=6.6e-40 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=4 to=117 evalue=4.8e-38 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=5 to=129 evalue=1.8e-33)
ACD66_77_4

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2473..3144
DNA (672bp) protein (224aa)
isochorismatase hydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
Isochorismatase-like hydrolases (db=superfamily db_id=SSF52499 from=45 to=219 evalue=7.8e-33 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
no description (db=Gene3D db_id=G3DSA:3.40.50.850 from=44 to=219 evalue=5.2e-31 interpro_id=IPR000868 interpro_description=Isochorismatase-like GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD66_77_5

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comp(3197..3496)
DNA (300bp) protein (100aa)
excinuclease ABC subunit C
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=73 evalue=1.2e-14 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG (db=HMMPfam db_id=PF01541 from=4 to=72 evalue=2.6e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gb def: Hypothetical protein MGC5178 (db=HMMPanther db_id=PTHR20208:SF7 from=2 to=30 evalue=0.00052)
Displaying 5 items

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