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ACD66_142

Alias: ACD66p_457623.10996.6

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_142_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

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comp(117..1043)
DNA (927bp) protein (309aa)
117..1043 - ( gc_cont=0.420)
Uncharacterized protein {ECO:0000313|EMBL:KKS18096.1}; TaxID=1618981 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWB1_41_7.;"
ACD66_142_2
GWF2_OD1_41_40, Uhrbacteria, Parcubacteria, Bacteria

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1360..1908
DNA (549bp) protein (183aa)
mnmA; thiouridylase (EC:2.8.1.-)
seg (db=Seg db_id=seg from=154 to=163)
TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11933 from=1 to=154 evalue=6.1e-58 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
(db=HMMPfam db_id=PF03054 from=1 to=155 evalue=5.5e-56 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
ACD66_142_3
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2731..3444
DNA (714bp) protein (238aa)
lepA; GTP-binding protein LepA
seg (db=Seg db_id=seg from=100 to=114)
seg (db=Seg db_id=seg from=222 to=237)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=45 to=60 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD66_142_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

3444..4604
DNA (1161bp) protein (387aa)
lepA; GTP-binding protein LepA
seg (db=Seg db_id=seg from=121 to=132)
seg (db=Seg db_id=seg from=357 to=372)
(db=HMMPfam db_id=PF06421 from=278 to=386 evalue=7.6e-39 interpro_id=IPR013842 interpro_description=GTP-binding protein LepA, C-terminal)
ACD66_142_5

Not on your lists

4606..4713
DNA (108bp) protein (36aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKD46965.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD66_142_6
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4710..6401
DNA (1692bp) protein (564aa)
single-stranded-DNA-specific exonuclease RecJ
single-stranded-DNA-specific exonuclease RecJ
coiled-coil (db=Coil db_id=coil from=309 to=330 evalue=NA)
ACD66_142_7
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

6408..6833
DNA (426bp) protein (142aa)
Ribonuclease H n=1 Tax=uncultured organism RepID=E0X766_9ZZZZ (db=UNIREF evalue=7.0e-31 bit_score=136.0 identity=52.55 coverage=92.2535211267606)
ribonuclease HI
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=132 evalue=1.7e-28 interpro_id=IPR012337 interpro_description=Ribonuclease H-like GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=3 to=134 evalue=5.3e-18)
ACD66_142_8
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

6884..8020
DNA (1137bp) protein (379aa)
type IV pilus assembly protein PilM
seg (db=Seg db_id=seg from=13 to=27)
seg (db=Seg db_id=seg from=138 to=153)
pilM: type IV pilus assembly protein PilM (db=HMMTigr db_id=TIGR01175 from=10 to=375 evalue=5.8e-34 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
ACD66_142_9
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

8025..8408
DNA (384bp) protein (128aa)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=126 evalue=2.0e-11 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
(db=HMMPfam db_id=PF00072 from=8 to=106 evalue=2.5e-06 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=6 to=106 evalue=7.2e-06)
RESPONSE_REGULATORY (db=ProfileScan db_id=PS50110 from=6 to=105 evalue=11.716 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD66_142_10
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

8513..9019
DNA (507bp) protein (169aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=9 to=23)
Pili subunits (db=superfamily db_id=SSF54523 from=6 to=78 evalue=8.1e-13)
BCTERIALGSPG (db=FPrintScan db_id=PR00813 from=41 to=59 evalue=7.1e-07 interpro_id=IPR000983 interpro_description=Bacterial general secretion pathway protein G GO=Molecular Function: protein transporter activity (GO:0008565), Cellular Component: type II protein secretion system complex (GO:0015627), Biological Process: protein secretion by the type II secretion system (GO:0015628))
ACD66_142_11
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

9043..9834
DNA (792bp) protein (264aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
seg (db=Seg db_id=seg from=214 to=226)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD66_142_12
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

10064..10879
DNA (816bp) protein (272aa)
seg (db=Seg db_id=seg from=67 to=80)
seg (db=Seg db_id=seg from=99 to=114)
seg (db=Seg db_id=seg from=147 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying 12 items

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