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ACD68_11

Alias: ACD68_138524.9716.8

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD68_11_1

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2..976
DNA (975bp) protein (325aa)
beta-glycosidase-like protein (EC:3.2.1.-); K01238 [EC:3.2.1.-] (db=KEGG evalue=1.0e-08 bit_score=64.3 identity=34.18 coverage=56.9230769230769)
Uncharacterized protein {ECO:0000313|EMBL:EKD46356.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hau:Haur_3225 1A family penicillin-binding protein alias=ACD18_C00055G00007,ACD18_736.26253.24G0007,ACD18_736.26253.24_7 id=13504 tax=ACD18 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc= OD1
ACD68_11_2

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980..1459
DNA (480bp) protein (160aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Clostridium RepID=A0Q0Z4_CLONN (db=UNIREF evalue=5.0e-13 bit_score=76.6 identity=33.58 coverage=81.25)
DUF177 (db=HMMPfam db_id=PF02620 from=59 to=155 evalue=3.1e-22 interpro_id=IPR003772 interpro_description=Protein of unknown function DUF177)
Uncharacterized protein {ECO:0000313|EMBL:EKD46357.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD68_11_3

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1441..1791
DNA (351bp) protein (117aa)
DUF970 (db=HMMPfam db_id=PF06153 from=6 to=115 evalue=6.3e-08 interpro_id=IPR010375 interpro_description=Protein of unknown function DUF970)
Uncharacterized protein {ECO:0000313|EMBL:EKD46358.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD68_11_4

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comp(1750..2088)
DNA (339bp) protein (113aa)
DUF721 (db=HMMPfam db_id=PF05258 from=7 to=96 evalue=1.0e-07 interpro_id=IPR007922 interpro_description=Protein of unknown function DUF721)
Uncharacterized protein {ECO:0000313|EMBL:EKD46359.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD68_11_5

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comp(2075..3190)
DNA (1116bp) protein (372aa)
recF; recombination protein F, RecF
seg (db=Seg db_id=seg from=41 to=55)
RECF_2 (db=PatternScan db_id=PS00618 from=309 to=327 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
RECF_1 (db=PatternScan db_id=PS00617 from=119 to=139 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD68_11_6
R_RIF_OD1_05_43_15b, RIF-OD1-5, Parcubacteria, Bacteria

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comp(3194..4807)
DNA (1614bp) protein (538aa)
biotin carboxylase-like protein
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=180 to=379 evalue=4.8e-19)
ATP-grasp_3 (db=HMMPfam db_id=PF02655 from=180 to=367 evalue=1.7e-09 interpro_id=IPR003806 interpro_description=ATP-grasp fold, DUF201-type)
ATP_GRASP (db=ProfileScan db_id=PS50975 from=185 to=390 evalue=21.358 interpro_id=IPR011761 interpro_description=ATP-grasp fold GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524))
ACD68_11_7

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comp(4807..6255)
DNA (1449bp) protein (483aa)
alpha-L-glutamate ligase-like protein
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=31 to=306 evalue=1.2e-15)
DUF785 (db=HMMPfam db_id=PF05618 from=346 to=473 evalue=1.2e-06 interpro_id=IPR008503 interpro_description=Protein of unknown function DUF785)
ATP_GRASP (db=ProfileScan db_id=PS50975 from=37 to=313 evalue=13.554 interpro_id=IPR011761 interpro_description=ATP-grasp fold GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: ATP binding (GO:0005524))
ACD68_11_8

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comp(6261..7757)
DNA (1497bp) protein (499aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=355)
transmembrane_regions (db=TMHMM db_id=tmhmm from=375 to=397)
ACD68_11_9
unknown

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comp(7765..7917)
DNA (153bp) protein (51aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=2 to=21)
ACD68_11_10

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comp(7926..8402)
DNA (477bp) protein (159aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
seg (db=Seg db_id=seg from=140 to=149)
seg (db=Seg db_id=seg from=128 to=135)
RUVC (db=PatternScan db_id=PS01321 from=114 to=149 evalue=0.0 interpro_id=IPR020563 interpro_description=Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site)
ACD68_11_11

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comp(8533..9264)
DNA (732bp) protein (244aa)
hypothetical protein
DUF28 (db=HMMPfam db_id=PF01709 from=5 to=240 evalue=1.0e-77 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
TIGR01033: DNA-binding regulatory protein, (db=HMMTigr db_id=TIGR01033 from=1 to=241 evalue=1.3e-77 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
YebC-like (db=superfamily db_id=SSF75625 from=5 to=241 evalue=3.0e-77 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD68_11_12

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comp(9467..9748)
DNA (282bp) protein (94aa)
dnaN; DNA polymerase III beta subunit DnaN (EC:2.7.7.7)
DNA clamp (db=superfamily db_id=SSF55979 from=7 to=93 evalue=1.9e-16)
DNA_pol3_beta_3 (db=HMMPfam db_id=PF02768 from=6 to=92 evalue=1.4e-14 interpro_id=IPR022635 interpro_description=DNA polymerase III, beta chain, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
no description (db=Gene3D db_id=G3DSA:3.10.150.10 from=7 to=92 evalue=8.7e-14 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
Displaying 12 items

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