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ACD68_22

Alias: ACD68_8848.3257.8

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD68_22_1

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1..135
DNA (135bp) protein (45aa)
1..135 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD46140.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD68_22_2

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143..403
DNA (261bp) protein (87aa)
transcriptional regulator HU subunit alpha
DNA-binding protein HU n=1 Tax=Turicibacter sp. PC909 RepID=D4W3S6_9FIRM (db=UNIREF evalue=2.0e-18 bit_score=94.7 identity=54.65 coverage=96.551724137931)
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=41 to=60 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=85 evalue=1.0e-27 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD68_22_3

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comp(999..1298)
DNA (300bp) protein (100aa)
seg (db=Seg db_id=seg from=59 to=68)
seg (db=Seg db_id=seg from=30 to=46)
seg (db=Seg db_id=seg from=2 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
ACD68_22_4

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comp(1285..1890)
DNA (606bp) protein (202aa)
seg (db=Seg db_id=seg from=42 to=58)
seg (db=Seg db_id=seg from=13 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=30 to=78 evalue=NA)
ACD68_22_5

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comp(1887..2432)
DNA (546bp) protein (182aa)
seg (db=Seg db_id=seg from=20 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
coiled-coil (db=Coil db_id=coil from=53 to=86 evalue=NA)
PilN (db=HMMPfam db_id=PF05137 from=4 to=154 evalue=6.4e-07 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
ACD68_22_6

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comp(2429..3289)
DNA (861bp) protein (287aa)
type IV pilus assembly protein PilM
seg (db=Seg db_id=seg from=226 to=237)
Competence_A (db=HMMPfam db_id=PF11104 from=6 to=104 evalue=1.1e-12)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=105 to=249 evalue=7.3e-09)
Displaying 6 items

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