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ACD68_36

Alias: ACD68_287350.5150.7

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD68_36_1

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comp(16..189)
DNA (174bp) protein (58aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD46255.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=2 Tax=Nitrosopumilaceae RepID=I3D0A1_9ARCH
ACD68_36_2

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comp(224..436)
DNA (213bp) protein (71aa)
PDZ domain-like (db=superfamily db_id=SSF50156 from=1 to=68 evalue=4.4e-15 interpro_id=IPR001478 interpro_description=PDZ/DHR/GLGF GO=Molecular Function: protein binding (GO:0005515))
SERINE PROTEASE FAMILY S1C HTRA-RELATED (db=HMMPanther db_id=PTHR22939 from=3 to=66 evalue=6.7e-11)
SERINE PROTEASE DO/HTRA-RELATED (db=HMMPanther db_id=PTHR22939:SF10 from=3 to=66 evalue=6.7e-11)
no description (db=Gene3D db_id=G3DSA:2.30.42.10 from=1 to=66 evalue=1.6e-10)
ACD68_36_3
RIFOXYA2_FULL_OD1_Falkowbacteria_38_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(438..1478)
DNA (1041bp) protein (347aa)
Trypsin
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=329 to=344)
seg (db=Seg db_id=seg from=112 to=125)
ACD68_36_4

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comp(1667..2401)
DNA (735bp) protein (245aa)
putative glycosyltransferase
seg (db=Seg db_id=seg from=35 to=46)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=10 to=213 evalue=1.2e-37)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=242 evalue=3.6e-35)
ACD68_36_5

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comp(2394..2810)
DNA (417bp) protein (139aa)
Putative Holliday junction resolvase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=RUVX_DESAD (db=UNIREF evalue=2.0e-17 bit_score=90.9 identity=36.57 coverage=90.6474820143885)
Holliday junction resolvase YqgF
UPF0081 (db=HMMPfam db_id=PF03652 from=3 to=132 evalue=5.5e-29 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=134 evalue=1.1e-26 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD68_36_6

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comp(2816..3577)
DNA (762bp) protein (254aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E1F4_DICTD (db=UNIREF evalue=2.0e-61 bit_score=239.0 identity=47.76 coverage=96.0629921259843)
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=6 to=252 evalue=4.3e-94 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) (db=HMMPanther db_id=PTHR10804 from=57 to=250 evalue=2.7e-71 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
ACD68_36_7

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comp(3592..4245)
DNA (654bp) protein (218aa)
Adenylate kinase
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=86 to=97 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=8 to=213 evalue=1.8e-39)
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=1 to=217 evalue=4.6e-35 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
ACD68_36_8

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comp(4255..5184)
DNA (930bp) protein (310aa)
preprotein translocase subunit SecY
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
transmembrane_regions (db=TMHMM db_id=tmhmm from=271 to=293)
Displaying 8 items

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