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ACD68_49

Alias: ACD68_49708.3480.7

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD68_49_1

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2..511
DNA (510bp) protein (170aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L2R7_THERP (db=UNIREF evalue=1.0e-32 bit_score=142.0 identity=57.02 coverage=69.4117647058823)
seg (db=Seg db_id=seg from=6 to=18)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=44 to=168 evalue=1.1e-32)
ACD68_49_2

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600..1946
DNA (1347bp) protein (449aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=278 to=295)
transmembrane_regions (db=TMHMM db_id=tmhmm from=302 to=324)
ACD68_49_3

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1952..2878
DNA (927bp) protein (309aa)
Protein translocase subunit SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=250 to=272)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=159)
transmembrane_regions (db=TMHMM db_id=tmhmm from=282 to=304)
ACD68_49_4

Not on your lists

3281..3514
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=5 to=13)
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=28 to=78 evalue=3.9e-06 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=44 to=78 evalue=9.9e-06 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=28 to=78 evalue=3.9e-05 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
Displaying 4 items

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