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ACD68_66

Alias: ACD68_407607.8279.7

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD68_66_1

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comp(23..451)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YKG1_9CYAN (db=UNIREF evalue=2.0e-52 bit_score=207.0 identity=66.9 coverage=98.6013986013986)
rplK; 50S ribosomal protein L11
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=126 to=140 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=141 evalue=1.1e-93 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD68_66_2

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comp(1482..2027)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein nusG
seg (db=Seg db_id=seg from=49 to=62)
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=1.1e-90 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD68_66_3

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comp(2037..2228)
DNA (192bp) protein (64aa)
preprotein translocase subunit SecE
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=10 to=38 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=6 to=62 evalue=7.7e-20 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
ACD68_66_4

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comp(2336..5695)
DNA (3360bp) protein (1120aa)
DNA gyrase subunit B
DNA gyrase subunit B
Ssp gyrB intein n=1 Tax=Synechocystis sp. PCC 6803 RepID=GYRB_SYNY3 (db=UNIREF evalue=0.0 bit_score=1048.0 identity=51.2 coverage=95.8035714285714)
seg (db=Seg db_id=seg from=2 to=31)
ACD68_66_5
R_RIF_OD1_01_42_19, RIF-OD1-1, Parcubacteria, Bacteria

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comp(5813..7918)
DNA (2106bp) protein (702aa)
pheT; phenylalanyl-tRNA synthetase subunit beta
pheT; phenylalanyl-tRNA synthetase subunit beta
Phenylalanyl-tRNA synthetase, beta subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W0F1_DESAS (db=UNIREF evalue=1.0e-102 bit_score=378.0 identity=34.35 coverage=95.5840455840456)
seg (db=Seg db_id=seg from=532 to=544)
ACD68_66_6

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comp(8206..8313)
DNA (108bp) protein (36aa)
phenylalanyl-tRNA synthetase subunit alpha
PHENYLALANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11538 from=1 to=35 evalue=4.2e-14 interpro_id=IPR002319 interpro_description=Phenylalanyl-tRNA synthetase alpha chain GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: phenylalanyl-tRNA aminoacylation (GO:0006432))
tRNA-synt_2d (db=HMMPfam db_id=PF01409 from=1 to=35 evalue=4.2e-13 interpro_id=IPR002319 interpro_description=Phenylalanyl-tRNA synthetase alpha chain GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: phenylalanyl-tRNA aminoacylation (GO:0006432))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=1 to=35 evalue=1.4e-12)
Displaying 6 items

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