ggKbase home page

ACD76_60_6

Organism: ACD76

near complete RP 48 / 55 MC: 10 BSCG 44 / 51 MC: 2 ASCG 0 / 38
Location: 4715..5197

Top 3 Functional Annotations

Value Algorithm Source
putative transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 133.0
  • Bit_score: 124
  • Evalue 3.40e-26
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=1 to=124 evalue=1.1e-46 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-46
NusB (db=HMMPfam db_id=PF01029 from=1 to=122 evalue=9.1e-37 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 483
ATGCAAACGCTGTATCAATGGGATTTTTTGCATTCAAATGCAAATGTGGACGATCTTATTGCGTATAGCATGAACGAATTTGCGCCCAAGTTTAATGACGAGGGCTATGTTAAGGAAACGGTTGACGGCGTTTTGTCGCGGATAGAGGAAATAGACGGATACATTAAAAAATTCGCTCCGGATTGGCCGATTGAACAAATAACTTTTGTTGATCGCAATATTTTGCGTCTTGGATTGTATGAAATGAAATTCGCGCAGAATATTCCGGCCAAGGTCGCGATTAACGAAGCTATTGAGCTTGCAAAAGCGTTTGGCGGGGAATCATCAGGAAAATTTGTAAACGGCGTTTTGGGAGCAATATACAAAGACATGATCGCTCGCGAAGAAATTAAAGAAATTGACCGCCAAACAAGCGAAGCAGAATCCAAACCTCGCGATATTTTGAGTTTAACCGATCCGTCCGGCGGACAAGAAATTGAATAA
PROTEIN sequence
Length: 161
MQTLYQWDFLHSNANVDDLIAYSMNEFAPKFNDEGYVKETVDGVLSRIEEIDGYIKKFAPDWPIEQITFVDRNILRLGLYEMKFAQNIPAKVAINEAIELAKAFGGESSGKFVNGVLGAIYKDMIAREEIKEIDRQTSEAESKPRDILSLTDPSGGQEIE*