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ACD76_60

Alias: ACD76_11047.5947.18

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD76_60_1

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3..560
DNA (558bp) protein (186aa)
coiled-coil (db=Coil db_id=coil from=158 to=186 evalue=NA)
seg (db=Seg db_id=seg from=173 to=178)
Uncharacterized protein {ECO:0000313|EMBL:EKD33537.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_60_2

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627..1277
DNA (651bp) protein (217aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein
Zn-dependent hydrolase of the beta-lactamase fold-like protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDI8_THET1 (db=UNIREF evalue=2.0e-23 bit_score=112.0 identity=33.18 coverage=93.5483870967742)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=191 evalue=2.4e-11)
Zn-dependent hydrolase of the beta-lactamase fold-like protein {ECO:0000313|EMBL:EKD33538.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_60_3

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1280..1639
DNA (360bp) protein (120aa)
seg (db=Seg db_id=seg from=19 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
coiled-coil (db=Coil db_id=coil from=94 to=115 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD33539.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_60_4

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1645..4266
DNA (2622bp) protein (874aa)
DNA gyrase subunit A n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017435BD (db=UNIREF evalue=0.0 bit_score=924.0 identity=56.95 coverage=91.304347826087)
DNA gyrase subunit A
DNA gyrase subunit A
seg (db=Seg db_id=seg from=3 to=9)
ACD76_60_5

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4324..4611
DNA (288bp) protein (96aa)
seg (db=Seg db_id=seg from=67 to=82)
seg (db=Seg db_id=seg from=4 to=21)
Zn-binding ribosomal proteins (db=superfamily db_id=SSF57829 from=2 to=57 evalue=3.2e-16 interpro_id=IPR011332 interpro_description=Ribosomal protein, zinc-binding domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L32p (db=HMMPfam db_id=PF01783 from=3 to=56 evalue=1.1e-15 interpro_id=IPR002677 interpro_description=Ribosomal protein L32p GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD76_60_6

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4715..5197
DNA (483bp) protein (161aa)
putative transcription termination factor
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=1 to=124 evalue=1.1e-46 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Molecular Function: transcription termination factor activity (GO:0003715), Biological Process: transcription termination (GO:0006353))
NusB (db=HMMPfam db_id=PF01029 from=1 to=122 evalue=9.1e-37 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
NusB-like (db=superfamily db_id=SSF48013 from=1 to=131 evalue=1.2e-33 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD76_60_7

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5214..5906
DNA (693bp) protein (231aa)
Ribonuclease 3
RNASE_3_1 (db=PatternScan db_id=PS00517 from=44 to=52 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RNaseIII: ribonuclease III (db=HMMTigr db_id=TIGR02191 from=8 to=228 evalue=2.7e-82 interpro_id=IPR011907 interpro_description=Ribonuclease III, bacterial GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: rRNA catabolic process (GO:0016075))
RIBONUCLEASE III (db=HMMPanther db_id=PTHR11207 from=7 to=228 evalue=5.7e-70)
Displaying 7 items

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