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ACD76_78_1

Organism: ACD76

near complete RP 48 / 55 MC: 10 BSCG 44 / 51 MC: 2 ASCG 0 / 38
Location: 111..866

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine 55 synthase similarity KEGG
DB: KEGG
  • Identity: 31.9
  • Coverage: 251.0
  • Bit_score: 107
  • Evalue 5.20e-21
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=3 to=246 evalue=1.9e-33 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.90e-33
TruB_N (db=HMMPfam db_id=PF01509 from=29 to=156 evalue=7.8e-23 interpro_id=IPR002501 interpro_description=Pseudouridine synthase II, TruB, N-terminal GO=Biological Process: RNA processing (GO:0006396)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.80e-23

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 756
ATGGAATACATTAATCTGTACAAACCGCTTTGCAAAACCCCGCTGGAAACTGTTTTGCGATTCAAAGATACGCATCCTGAATATAAAGAAACCAAGCTTGCGTACGCAGGCCGGCTTGATCCAATGGCCGAGGGCGTGCTTTTGATTGTCCCTGGAGAGAATATTATGGGGTATCTTAATGAAGAAAAAGAATACGAAGCAACGATTTTGTTCGGCCTTGGAACTGATACTTACGATACGCTTGGTGTTTTGAATGAGCATTCGTTAAAAGAATTGGACGAAGAAAGAGTAAAAAAAGAAATAAACAATATGCTTGGCATGAATGTTCTTGCTTATCCTGATTATTCATCAGTTCAAGTTGGCGGCAAACCGCTTTTGCATTGGGCAAGAAGGGGAATGATTGATAAAGTCCGCGTTCCAAAAGGTGAAATGGAAGTCAAAAATATTGAAATTAAAGAATTCAGAAAAGTCGGTGCAACAGATTTGCTTGATAAAGTCGTAAAACGAGCAGACGCTGTGCGCGGAGATTTCCGTCAAAAAGAGATAATTGATTCATGGAAGAAGTATCTTGATGGAGCCGATCAAAATTTTATTGCTGTTGATGTAAAAATGGTCGTGAGCGCCGGAACATACATCCGCGCAATAGCGCACGAACTTGGAATACGCGTTGGATCATGCGCTATTTTGCTTAATTTAAAAAGAACCCGCCTTGGCGAGCATAAAATTGAAGATTCAATTTGGGTCTATTCTAAATAG
PROTEIN sequence
Length: 252
MEYINLYKPLCKTPLETVLRFKDTHPEYKETKLAYAGRLDPMAEGVLLIVPGENIMGYLNEEKEYEATILFGLGTDTYDTLGVLNEHSLKELDEERVKKEINNMLGMNVLAYPDYSSVQVGGKPLLHWARRGMIDKVRVPKGEMEVKNIEIKEFRKVGATDLLDKVVKRADAVRGDFRQKEIIDSWKKYLDGADQNFIAVDVKMVVSAGTYIRAIAHELGIRVGSCAILLNLKRTRLGEHKIEDSIWVYSK*