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ACD76_78

Alias: ACD76_12952.6977.19

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD76_78_1

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111..866
DNA (756bp) protein (252aa)
tRNA pseudouridine 55 synthase
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=3 to=246 evalue=1.9e-33 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
TruB_N (db=HMMPfam db_id=PF01509 from=29 to=156 evalue=7.8e-23 interpro_id=IPR002501 interpro_description=Pseudouridine synthase II, TruB, N-terminal GO=Biological Process: RNA processing (GO:0006396))
TRNA-PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR13767 from=93 to=247 evalue=2.8e-17)
ACD76_78_2

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comp(854..1540)
DNA (687bp) protein (229aa)
tRNA/rRNA methylase (EC:2.1.1.-)
seg (db=Seg db_id=seg from=63 to=78)
RNA-METHYLASE-RELATED (db=HMMPanther db_id=PTHR12029:SF8 from=50 to=223 evalue=1.1e-24)
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=50 to=223 evalue=1.1e-24)
ACD76_78_3

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1632..1913
DNA (282bp) protein (94aa)
1632..1913 + (rbs_motif=AAGAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD33474.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_78_4

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2001..3473
DNA (1473bp) protein (491aa)
pepA; leucyl aminopeptidase
pepA; leucyl aminopeptidase
Probable cytosol aminopeptidase n=1 Tax=Aquifex aeolicus RepID=AMPA_AQUAE (db=UNIREF evalue=2.0e-95 bit_score=353.0 identity=40.69 coverage=98.1670061099796)
seg (db=Seg db_id=seg from=113 to=126)
ACD76_78_5

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3473..4636
DNA (1164bp) protein (388aa)
Probable tRNA sulfurtransferase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J374_9BACL (db=UNIREF evalue=6.0e-90 bit_score=334.0 identity=44.47 coverage=99.2268041237113)
thiamine biosynthesis protein ThiI
thiamine biosynthesis protein ThiI
TIGR00342: thiamine biosynthesis/tRNA modif (db=HMMTigr db_id=TIGR00342 from=5 to=375 evalue=4.1e-132 interpro_id=IPR003720 interpro_description=Thiamine biosynthesis protein GO=Molecular Function: RNA binding (GO:0003723), Cellular Component: cytoplasm (GO:0005737), Biological Process: thiamin biosynthetic process (GO:0009228))
ACD76_78_6

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4782..5468
DNA (687bp) protein (229aa)
Methyltransferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAD9_9SPHI (db=UNIREF evalue=2.0e-48 bit_score=195.0 identity=45.61 coverage=97.3799126637555)
tetrapyrrole methylase family protein
RSMI (db=PatternScan db_id=PS01296 from=81 to=92 evalue=0.0 interpro_id=IPR018063 interpro_description=Uncharacterised protein family UPF0011, conserved site)
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=2 to=222 evalue=1.9e-67 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD76_78_7

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5458..6972
DNA (1515bp) protein (505aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase n=5 Tax=Thermotogaceae RepID=SYM_THEMA (db=UNIREF evalue=7.0e-132 bit_score=474.0 identity=48.44 coverage=98.2178217821782)
seg (db=Seg db_id=seg from=124 to=135)
Displaying 7 items

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