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ACD83_36

Alias: ACD83_153633.3886.5

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_36_1
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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2..190
DNA (189bp) protein (63aa)
Peptide deformylase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B791_9BACI (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=58.7 coverage=71.4285714285714)
seg (db=Seg db_id=seg from=47 to=62)
Pep_deformylase (db=HMMPfam db_id=PF01327 from=2 to=55 evalue=8.8e-19 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Peptide deformylase (db=superfamily db_id=SSF56420 from=3 to=62 evalue=2.4e-17 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD83_36_2
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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204..1103
DNA (900bp) protein (300aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Formyltransferase (db=superfamily db_id=SSF53328 from=11 to=214 evalue=1.1e-48 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=8 to=213 evalue=6.5e-47 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=11 to=295 evalue=2.2e-45 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
ACD83_36_3

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1432..1764
DNA (333bp) protein (111aa)
seg (db=Seg db_id=seg from=6 to=18)
seg (db=Seg db_id=seg from=23 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKD23140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD83_36_4
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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1878..2216
DNA (339bp) protein (113aa)
hypothetical protein
KH_2 (db=HMMPfam db_id=PF07650 from=41 to=82 evalue=0.00013 interpro_id=IPR004044 interpro_description=K Homology, type 2 GO=Molecular Function: RNA binding (GO:0003723))
Uncharacterized protein {ECO:0000313|EMBL:KKQ90605.1}; TaxID=1618334 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_38_9.;"
UPF0109 protein LDC_0451 alias=gwc1_scaffold_23_157 id=2921964 tax=GWC1_KAZAN_52_13 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
ACD83_36_5
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

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2348..2656
DNA (309bp) protein (103aa)
HAD-like (db=superfamily db_id=SSF56784 from=21 to=78 evalue=3.9e-07)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
ACD83_36_6

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2759..3406
DNA (648bp) protein (216aa)
tRNA (guanine-N1)-methyltransferase
seg (db=Seg db_id=seg from=75 to=85)
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=214 evalue=1.6e-97 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=210 evalue=1.1e-93 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
ACD83_36_7

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3403..3918
DNA (516bp) protein (172aa)
UvrABC system protein B n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5H7_MAGSM (db=UNIREF evalue=9.0e-69 bit_score=261.0 identity=68.42 coverage=98.8372093023256)
excinuclease ABC subunit B
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=3 to=172 evalue=1.8e-74)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=172 evalue=7.2e-49)
Displaying 7 items

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