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ACD83_60

Alias: ACD83_397273.3897.5

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_60_1
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

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comp(2..325)
DNA (324bp) protein (108aa)
Peptide deformylase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSQ3_9PLAN (db=UNIREF evalue=6.0e-11 bit_score=69.7 identity=35.85 coverage=86.1111111111111)
peptide deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] (db=KEGG evalue=8.0e-11 bit_score=69.3 identity=35.19 coverage=87.962962962963)
Pep_deformylase (db=HMMPfam db_id=PF01327 from=2 to=107 evalue=2.8e-21 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Peptide deformylase (db=superfamily db_id=SSF56420 from=1 to=108 evalue=4.0e-19 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD83_60_2
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

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comp(330..929)
DNA (600bp) protein (200aa)
330..929 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein Tax=RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated
ACD83_60_3
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

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comp(1305..3113)
DNA (1809bp) protein (603aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=382)
ACD83_60_4
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

3194..3931
DNA (738bp) protein (246aa)
seg (db=Seg db_id=seg from=114 to=127)
seg (db=Seg db_id=seg from=80 to=93)
seg (db=Seg db_id=seg from=23 to=41)
seg (db=Seg db_id=seg from=5 to=21)
Displaying 4 items

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