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ACD83_74

Alias: ACD83_151601.2796.5

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_74_1

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comp(1..450)
DNA (450bp) protein (150aa)
DNA polymerase III subunits gamma/tau
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=150 evalue=1.2e-31)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=150 evalue=1.4e-22)
WERNER HELICASE INTERACTING PROTEIN (db=HMMPanther db_id=PTHR13779:SF1 from=11 to=62 evalue=4.0e-08)
ACD83_74_2
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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comp(465..572)
DNA (108bp) protein (36aa)
465..572 - (rbs_motif=TAAT rbs_spacer=8bp)
hypothetical protein Tax=GWA2_Berkelbacteria_35_9
ACD83_74_3
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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716..1156
DNA (441bp) protein (147aa)
hypothetical protein
seg (db=Seg db_id=seg from=121 to=136)
zf-CHC2 (db=HMMPfam db_id=PF01807 from=8 to=99 evalue=5.2e-38 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
Zinc beta-ribbon (db=superfamily db_id=SSF57783 from=3 to=104 evalue=9.1e-36)
ACD83_74_4
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

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1345..2367
DNA (1023bp) protein (341aa)
DNA primase
DNA primase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TSH0_ALKMQ (db=UNIREF evalue=3.0e-30 bit_score=136.0 identity=37.26 coverage=61.2903225806452)
seg (db=Seg db_id=seg from=40 to=52)
seg (db=Seg db_id=seg from=326 to=340)
ACD83_74_5
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

2470..2829
DNA (360bp) protein (120aa)
RpoD family RNA polymerase sigma-70 subunit
RNA polymerase sigma factor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Z3_NATTJ (db=UNIREF evalue=8.0e-24 bit_score=112.0 identity=46.46 coverage=97.5)
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=59 to=120 evalue=1.2e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma70_r1_2 (db=HMMPfam db_id=PF00140 from=59 to=95 evalue=1.2e-18 interpro_id=IPR009042 interpro_description=RNA polymerase sigma-70 region 1.2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Displaying 5 items

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