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ACD83_74_5

Organism: ACD83

partial RP 11 / 55 MC: 1 BSCG 10 / 51 MC: 1 ASCG 0 / 38
Location: 2470..2829

Top 3 Functional Annotations

Value Algorithm Source
RpoD family RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 127.0
  • Bit_score: 113
  • Evalue 4.60e-23
RNA polymerase sigma factor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Z3_NATTJ (db=UNIREF evalue=8.0e-24 bit_score=112.0 identity=46.46 coverage=97.5) similarity UNIREF
DB: UNIREF
  • Identity: 46.46
  • Coverage: 97.5
  • Bit_score: 112
  • Evalue 8.00e-24
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=59 to=120 evalue=1.2e-18 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-18

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Taxonomy

GWA2_Berkelbacteria_35_9 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGACCTATCGTGAAATTTTACAAGCCGTCGATAATCCGGAAAAAAATATTGCTGAAATTGACCATTTTTATCATCTGTTGGAAAAAACTGGTATCGGAGTTCGAGAACATAAAAAATTGCTCGATATTAGTGGCGCTGTCAAACCGGAAGAGCCGAGTTTAACTGATATTTCTAGCGATTCTGTTCGTATGTATTTAAGAGAAATCGGTCGAATTCCCCTTTTGACTGGGGCTGACGAAATTCAACTCGCCAAAAGAATCGAAAAAGGCGAGCAATCGGCAAAAAAGAAATTGATTGAAGCCAACTTGCGTTTAGTAGTTTCTGTAGCCAAAAAACATATGGGACGGGGATTGAGCCTT
PROTEIN sequence
Length: 120
VTYREILQAVDNPEKNIAEIDHFYHLLEKTGIGVREHKKLLDISGAVKPEEPSLTDISSDSVRMYLREIGRIPLLTGADEIQLAKRIEKGEQSAKKKLIEANLRLVVSVAKKHMGRGLSL