ggKbase home page

ACD83_117

Alias: ACD83_231266.2738.4

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_117_1
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(3..125)
DNA (123bp) protein (41aa)
seg (db=Seg db_id=seg from=2 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein (Fragment) Tax=RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated
ACD83_117_2
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(122..724)
DNA (603bp) protein (201aa)
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=RSMH_COPPD (db=UNIREF evalue=1.0e-38 bit_score=162.0 identity=44.44 coverage=96.0199004975124)
Methyltransf_5 (db=HMMPfam db_id=PF01795 from=1 to=198 evalue=4.5e-57 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
S-ADENOSYL-METHYLTRANSFERASE MRAW (db=HMMPanther db_id=PTHR11265 from=1 to=199 evalue=1.5e-47 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
ACD83_117_3
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(763..1056)
DNA (294bp) protein (98aa)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAS1_THEAQ (db=UNIREF evalue=8.0e-12 bit_score=72.8 identity=41.46 coverage=77.5510204081633)
SAM-dependent methyltransferase
seg (db=Seg db_id=seg from=88 to=97)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=5 to=80 evalue=8.6e-20)
ACD83_117_4
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(1053..1469)
DNA (417bp) protein (139aa)
mraZ; cell division protein MraZ
coiled-coil (db=Coil db_id=coil from=117 to=138 evalue=NA)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=137 evalue=2.7e-29)
MRAZ_ENTFA_O07103; (db=BlastProDom db_id=PD006745 from=1 to=138 evalue=2.0e-24 interpro_id=IPR003444 interpro_description=MraZ)
ACD83_117_5
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(1723..2517)
DNA (795bp) protein (265aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=7 to=24)
Uncharacterized protein Tax=RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated
ACD83_117_6
RIFOXYA1_FULL_OP11_Pacebacteria_38_18_curated, Pacebacteria, Microgenomates, Bacteria

Not on your lists

comp(2523..2771)
DNA (249bp) protein (83aa)
hypothetical protein
seg (db=Seg db_id=seg from=49 to=63)
GLYCYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10745 from=1 to=81 evalue=2.5e-23 interpro_id=IPR018160 interpro_description=Glycyl-tRNA synthetase, alpha2 dimer, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
no description (db=Gene3D db_id=G3DSA:3.40.50.800 from=1 to=81 evalue=2.8e-23 interpro_id=IPR004154 interpro_description=Anticodon-binding GO=Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412))
Displaying 6 items

View Taxonomy