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ACD83_128

Alias: ACD83_223664.2475.6

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD83_128_1
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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3..635
DNA (633bp) protein (211aa)
hypothetical protein
DUF28 (db=HMMPfam db_id=PF01709 from=2 to=209 evalue=2.7e-71 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
YebC-like (db=superfamily db_id=SSF75625 from=1 to=210 evalue=3.4e-68 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR12532 from=2 to=210 evalue=1.4e-44 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
ACD83_128_2
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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768..1190
DNA (423bp) protein (141aa)
ruvC; Holliday junction resolvase
seg (db=Seg db_id=seg from=101 to=111)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=99 evalue=1.1e-27 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RuvC (db=HMMPfam db_id=PF02075 from=3 to=99 evalue=9.3e-27 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD83_128_3
GWA2_Berkelbacteria_38_9, Berkelbacteria, Bacteria

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comp(1387..2508)
DNA (1122bp) protein (374aa)
VanW family protein
seg (db=Seg db_id=seg from=341 to=357)
VanW (db=HMMPfam db_id=PF04294 from=115 to=269 evalue=5.9e-36 interpro_id=IPR007391 interpro_description=VanW)
PG_binding_4 (db=HMMPfam db_id=PF12229 from=9 to=69 evalue=7.1e-08 interpro_id=IPR022029 interpro_description=Putative peptidoglycan binding domain)
Displaying 3 items

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