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ACD9_28

Alias: ACD9_130582.2668.6

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_28_1
Microgenomates bacterium GW2011_GWC1_39_12, Microgenomates, Bacteria

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comp(2..427)
DNA (426bp) protein (142aa)
coiled-coil (db=Coil db_id=coil from=39 to=60 evalue=NA)
seg (db=Seg db_id=seg from=86 to=94)
seg (db=Seg db_id=seg from=38 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD9_28_2

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523..1383
DNA (861bp) protein (287aa)
hypothetical protein
Site-specific recombinase, phage integrase family n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFS7_CLOAI (db=UNIREF evalue=1.0e-31 bit_score=140.0 identity=33.7 coverage=89.5470383275261)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=112 to=282 evalue=2.6e-36 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=112 to=282 evalue=2.5e-34 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD9_28_3
GWB1_OP11_40_9_partial, Microgenomates, Bacteria

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1424..1630
DNA (207bp) protein (69aa)
1424..1630 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR79819.1}; TaxID=1618504 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_40_9.;"
ACD9_28_4

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1632..2702
DNA (1071bp) protein (357aa)
hypothetical protein
Valyl-tRNA synthetase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTH6_9BACT (db=UNIREF evalue=2.0e-89 bit_score=333.0 identity=48.51 coverage=97.7591036414566)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=52 to=63 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
VALYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11946:SF5 from=1 to=357 evalue=3.0e-114 interpro_id=IPR002303 interpro_description=Valyl-tRNA synthetase, class Ia GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: valine-tRNA ligase activity (GO:0004832), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: valyl-tRNA aminoacylation (GO:0006438))
Displaying 4 items

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