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ACD9_92

Alias: ACD9_5766.4117.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_92_1

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comp(103..360)
DNA (258bp) protein (86aa)
103..360 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE18695.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_92_2

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492..1571
DNA (1080bp) protein (360aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=13 to=26)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=43 to=271 evalue=9.4e-34)
ACD9_92_3

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1613..2170
DNA (558bp) protein (186aa)
ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=157 to=178 evalue=NA)
frr: ribosome recycling factor (db=HMMTigr db_id=TIGR00496 from=10 to=185 evalue=1.7e-73 interpro_id=IPR002661 interpro_description=Ribosome recycling factor GO=Biological Process: translation (GO:0006412))
RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF) (db=HMMPanther db_id=PTHR20982:SF3 from=1 to=185 evalue=3.2e-72 interpro_id=IPR015998 interpro_description=Ribosome recycling factor, bacterial-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: translational termination (GO:0006415))
ACD9_92_4

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2335..3465
DNA (1131bp) protein (377aa)
membrane-associated zinc metalloprotease
transmembrane_regions (db=TMHMM db_id=tmhmm from=345 to=364)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=273)
ACD9_92_5

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3639..4094
DNA (456bp) protein (152aa)
transcription elongation factor GreA
Transcription elongation factor n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S2G6_9FIRM (db=UNIREF evalue=5.0e-32 bit_score=139.0 identity=52.29 coverage=96.0526315789474)
coiled-coil (db=Coil db_id=coil from=7 to=35 evalue=NA)
GREAB_1 (db=PatternScan db_id=PS00829 from=16 to=47 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Displaying 5 items

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