ggKbase home page

ACD9_115

Alias: ACD9_252876.3278.6

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_115_1

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKE19146.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_115_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

267..662
DNA (396bp) protein (132aa)
decarboxylase
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=28 to=113 evalue=1.1e-19)
no description (db=Gene3D db_id=G3DSA:3.40.50.450 from=59 to=113 evalue=3.8e-13)
lysine decarboxylase family protein; K06966 alias=ACD9_C00115G00002,ACD9_252876.3278.6G0002,ACD9_252876.3278.6_2 id=138240 tax=ACD9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD9_115_3
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

653..1033
DNA (381bp) protein (127aa)
lysine decarboxylase family protein
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=1 to=121 evalue=1.4e-31)
Lysine_decarbox (db=HMMPfam db_id=PF03641 from=2 to=115 evalue=7.3e-29 interpro_id=IPR005269 interpro_description=Conserved hypothetical protein CHP00730)
no description (db=Gene3D db_id=G3DSA:3.40.50.450 from=1 to=119 evalue=2.3e-25)
ACD9_115_4
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1042..2616
DNA (1575bp) protein (525aa)
hypothetical protein cdiviTM7_02864 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2083 (db=UNIREF evalue=4.0e-41 bit_score=172.0 identity=25.99 coverage=98.2857142857143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=461 to=483)
transmembrane_regions (db=TMHMM db_id=tmhmm from=424 to=446)
transmembrane_regions (db=TMHMM db_id=tmhmm from=397 to=419)
ACD9_115_5
GWF2_OD1_41_430, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2616..3311
DNA (696bp) protein (232aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=65 to=194 evalue=1.3e-18 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
Glyco_hydro_10 (db=HMMPfam db_id=PF00331 from=79 to=172 evalue=8.9e-09 interpro_id=IPR001000 interpro_description=Glycoside hydrolase, family 10 GO=Molecular Function: hydrolase activity, hydrolyzing O-glycosyl compounds (GO:0004553), Biological Process: carbohydrate metabolic process (GO:0005975))
no description (db=Gene3D db_id=G3DSA:3.20.20.80 from=41 to=166 evalue=5.0e-08 interpro_id=IPR013781 interpro_description=Glycoside hydrolase, subgroup, catalytic core GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: cation binding (GO:0043169))
Displaying 5 items

View Taxonomy