Alias: ACD9_37683.8053.9
name | lists | location/seqs | annotations | notes |
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ACD9_119_1
unknown
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Not on your lists |
comp(1..60)
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1..60 - (rbs_motif=TAA rbs_spacer=12bp)
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ACD9_119_2
uncultured bacterium, Bacteria
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Not on your lists |
110..1891
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infB; translation initiation factor IF-2
infB; translation initiation factor IF-2
Translation initiation factor IF-2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=IF2_CARHZ (db=UNIREF evalue=2.0e-134 bit_score=483.0 identity=45.91 coverage=98.3164983164983)
seg (db=Seg db_id=seg from=79 to=90)
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ACD9_119_3
uncultured bacterium, Bacteria
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Not on your lists |
2010..2339
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Ribosome-binding factor A n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J8M5_9PORP (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=36.45 coverage=94.5454545454545)
ribosome-binding factor A; K02834 ribosome-binding factor A (db=KEGG evalue=5.0e-09 bit_score=63.2 identity=34.58 coverage=95.4545454545455)
RBFA (db=HMMPfam db_id=PF02033 from=5 to=106 evalue=5.3e-18 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
Ribosome-binding factor A, RbfA (db=superfamily db_id=SSF89919 from=5 to=100 evalue=3.2e-16 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
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ACD9_119_4
uncultured bacterium, Bacteria
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Not on your lists |
2614..3573
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MgpA protein
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=18 to=318 evalue=7.2e-57)
POLYA POLYMERASE (db=HMMPanther db_id=PTHR13734:SF4 from=9 to=313 evalue=1.6e-45)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=9 to=313 evalue=1.6e-45)
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ACD9_119_5
uncultured bacterium, Bacteria
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Not on your lists |
3770..4591
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Endonuclease IV (EC:3.1.21.- 3.1.21.2)
Putative endonuclease 4 (Endonuclease IV) (Endodeoxyribonuclease IV) n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MJL4_9BACT (db=UNIREF evalue=9.0e-44 bit_score=180.0 identity=38.3 coverage=99.2700729927007)
seg (db=Seg db_id=seg from=194 to=207)
AP_NUCLEASE_F2_3 (db=PatternScan db_id=PS00731 from=209 to=225 evalue=0.0 interpro_id=IPR018246 interpro_description=AP endonuclease, family 2, zinc binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270))
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ACD9_119_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(4674..6968)
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radical SAM domain-containing protein (db=KEGG evalue=3.0e-14 bit_score=84.3 identity=24.94 coverage=40.0)
radical SAM domain-containing protein alias=ACD9_37683.8053.9_6,ACD9_37683.8053.9G0006,ACD9_C00119G00006 id=138259 tax=ACD9 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
Radical SAM protein {ECO:0000313|EMBL:EKE18884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD9_119_7
uncultured bacterium, Bacteria
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Not on your lists |
7205..8032
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transcriptional regulator TrmB
seg (db=Seg db_id=seg from=78 to=93)
TrmB (db=HMMPfam db_id=PF01978 from=8 to=76 evalue=6.3e-15 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=96 evalue=6.3e-09)
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