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ACD9_24_17

Organism: ACD9

partial RP 33 / 55 MC: 8 BSCG 28 / 51 MC: 5 ASCG 0 / 38
Location: comp(13760..14299)

Top 3 Functional Annotations

Value Algorithm Source
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 171.0
  • Bit_score: 86
  • Evalue 8.90e-15
LigT-like (db=superfamily db_id=SSF55144 from=4 to=178 evalue=5.6e-30 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.60e-30
2_5_ligase: 2'-5' RNA ligase (db=HMMTigr db_id=TIGR02258 from=7 to=178 evalue=1.7e-25 interpro_id=IPR004175 interpro_description=2',5' RNA ligase GO=Molecular Function: 2'-5'-RNA ligase activity (GO:0008664), Biological Process: RNA metabolic process (GO:0016070)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-25

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 540
ATGCAAAAGAAAAAAATATTTGTCGAGATCAACATACCTAACCAAATCAGAAGACGGCTTCAGCAGGTCATTGCTAAGTGGTCAGATTTGCCGATTAAATGGATGAAAGAGGAGAATTTTCATATAACAGTGTCTTTTGTCGGATATGTTGATGAAACGGTTATTCCTGAAATTTGCGAAAAAGTTAGTCATGCCGTGGAGAATTTTGAGTCTTTTGAACTTGTTTTTGATAGTATCGAACTTGGTCCTAATCTAGACGATCCTAAAACTGTTTGGCTTACTGGGCAGCCGAATGTAGAACTTGGCATGCTTAATGAAGAAGTTGAAAGAGCACTTGGGATGAGACCTTCGGCGCATAAAGAATTCAGACCGCATATTACGCTTGGAAGAATTAGGAAGATTAAGTGGGATGAACTTTCAGAAAAACCAATTATTGCTGAAAAAATGAATGTTTCAATGAGCGTAGACAGCGTTTCAATTATGGAAAGTAAAGGCGGGGGAGCGGAATATGTGTCTTTGGAAGAATGCCCGTTGGCATAA
PROTEIN sequence
Length: 180
MQKKKIFVEINIPNQIRRRLQQVIAKWSDLPIKWMKEENFHITVSFVGYVDETVIPEICEKVSHAVENFESFELVFDSIELGPNLDDPKTVWLTGQPNVELGMLNEEVERALGMRPSAHKEFRPHITLGRIRKIKWDELSEKPIIAEKMNVSMSVDSVSIMESKGGGAEYVSLEECPLA*