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ACD9_24

Alias: ACD9_62709.21054.9

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD9_24_1

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1..1188
DNA (1188bp) protein (396aa)
pyrG; CTP synthetase (EC:6.3.4.2)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Thermococcus barophilus MP RepID=B5IUY2_9EURY (db=UNIREF evalue=3.0e-93 bit_score=345.0 identity=50.77 coverage=95.2020202020202)
seg (db=Seg db_id=seg from=104 to=121)
ACD9_24_2

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comp(1465..1926)
DNA (462bp) protein (154aa)
50S ribosomal protein L27
seg (db=Seg db_id=seg from=99 to=111)
RIBOSOMAL_L27 (db=PatternScan db_id=PS00831 from=34 to=48 evalue=0.0 interpro_id=IPR018261 interpro_description=Ribosomal protein L27, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L27: ribosomal protein L27 (db=HMMTigr db_id=TIGR00062 from=1 to=81 evalue=2.7e-34 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD9_24_3

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2219..2662
DNA (444bp) protein (148aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=43)
seg (db=Seg db_id=seg from=89 to=101)
Ada DNA repair protein, N-terminal domain (N-Ada 10) (db=superfamily db_id=SSF57884 from=75 to=140 evalue=4.4e-07 interpro_id=IPR004026 interpro_description=Ada DNA repair, metal-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: methyltransferase activity (GO:0008168), Molecular Function: zinc ion binding (GO:0008270))
Uncharacterized protein {ECO:0000313|EMBL:EKE18671.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_4

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2714..3379
DNA (666bp) protein (222aa)
hypothetical protein
hypothetical protein alias=ACD9_62709.21054.9G0004,ACD9_62709.21054.9_4,ACD9_C00024G00004 id=137617 tax=ACD9 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE18672.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_5

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3363..3662
DNA (300bp) protein (100aa)
coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
seg (db=Seg db_id=seg from=61 to=74)
Uncharacterized protein {ECO:0000313|EMBL:EKE18673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_6

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3833..4540
DNA (708bp) protein (236aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAL5_9BACT (db=UNIREF evalue=1.0e-46 bit_score=189.0 identity=42.61 coverage=92.3728813559322)
glycerophosphodiester phosphodiesterase
PLC-like phosphodiesterases (db=superfamily db_id=SSF51695 from=1 to=234 evalue=6.7e-59 interpro_id=IPR017946 interpro_description=PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: phosphoric diester hydrolase activity (GO:0008081))
no description (db=Gene3D db_id=G3DSA:3.20.20.190 from=4 to=235 evalue=2.4e-56 interpro_id=IPR017946 interpro_description=PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: phosphoric diester hydrolase activity (GO:0008081))
ACD9_24_7

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4598..5290
DNA (693bp) protein (231aa)
uridylate kinase
pyrH_arch: putative uridylate kinase (db=HMMTigr db_id=TIGR02076 from=6 to=230 evalue=3.0e-54 interpro_id=IPR011818 interpro_description=Uridylate kinase, archaeal/spirochete, putative GO=Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221), Molecular Function: uridylate kinase activity (GO:0009041))
Carbamate kinase-like (db=superfamily db_id=SSF53633 from=4 to=229 evalue=4.2e-37 interpro_id=IPR001048 interpro_description=Aspartate/glutamate/uridylate kinase GO=Biological Process: cellular amino acid biosynthetic process (GO:0008652))
no description (db=Gene3D db_id=G3DSA:3.40.1160.10 from=1 to=228 evalue=1.2e-32 interpro_id=IPR001048 interpro_description=Aspartate/glutamate/uridylate kinase GO=Biological Process: cellular amino acid biosynthetic process (GO:0008652))
ACD9_24_8

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comp(5356..6486)
DNA (1131bp) protein (377aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=267 to=295 evalue=NA)
DUF2800 (db=HMMPfam db_id=PF10926 from=2 to=294 evalue=6.4e-09 interpro_id=IPR021229 interpro_description=Protein of unknown function DUF2800)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=2 to=169 evalue=2.8e-06 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
ACD9_24_9

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6632..7054
DNA (423bp) protein (141aa)
transcriptional regulator
rrf2_super: rrf2 family protein (putative (db=HMMTigr db_id=TIGR00738 from=12 to=140 evalue=2.5e-38 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=16 to=140 evalue=2.3e-29)
Rrf2 (db=HMMPfam db_id=PF02082 from=12 to=92 evalue=6.6e-25 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
ACD9_24_10

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7059..8270
DNA (1212bp) protein (404aa)
iscS2; cysteine desulfurase IscS (EC:2.8.1.7)
iscS2; cysteine desulfurase IscS (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AA22_CARHZ (db=UNIREF evalue=3.0e-95 bit_score=352.0 identity=50.38 coverage=94.3069306930693)
seg (db=Seg db_id=seg from=330 to=343)
ACD9_24_11

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8398..8784
DNA (387bp) protein (129aa)
FeS cluster assembly scaffold protein NifU
NifU_N (db=HMMPfam db_id=PF01592 from=3 to=128 evalue=5.2e-47 interpro_id=IPR002871 interpro_description=NIF system FeS cluster assembly, NifU, N-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
IRON-SULFUR CLUSTER ASSEMBLY ENZYME (NIFU HOMOLOG) (db=HMMPanther db_id=PTHR10093 from=1 to=127 evalue=2.0e-46 interpro_id=IPR002871 interpro_description=NIF system FeS cluster assembly, NifU, N-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
SufE/NifU (db=superfamily db_id=SSF82649 from=4 to=128 evalue=9.9e-41)
ACD9_24_12

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8794..9207
DNA (414bp) protein (138aa)
hypothetical protein
Acetyltransferase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VYB3_9ACTO (db=UNIREF evalue=2.0e-12 bit_score=74.3 identity=36.21 coverage=81.8840579710145)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=127 evalue=1.7e-23 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=4 to=130 evalue=4.4e-16 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD9_24_13

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comp(10025..10480)
DNA (456bp) protein (152aa)
Peptidase_C39 (db=HMMPfam db_id=PF03412 from=14 to=121 evalue=2.2e-06 interpro_id=IPR005074 interpro_description=Peptidase C39, bacteriocin processing GO=Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: integral to membrane (GO:0016021))
Uncharacterized protein {ECO:0000313|EMBL:EKE18669.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_14

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comp(10584..11456)
DNA (873bp) protein (291aa)
coiled-coil (db=Coil db_id=coil from=56 to=91 evalue=NA)
coiled-coil (db=Coil db_id=coil from=105 to=140 evalue=NA)
coiled-coil (db=Coil db_id=coil from=189 to=221 evalue=NA)
coiled-coil (db=Coil db_id=coil from=224 to=252 evalue=NA)
ACD9_24_15

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comp(11463..13007)
DNA (1545bp) protein (515aa)
glutamyl/glutaminyl-tRNA synthetase
glutamyl/glutaminyl-tRNA synthetase
Glutamyl-tRNA synthetase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=SYE_CHLT3 (db=UNIREF evalue=2.0e-131 bit_score=473.0 identity=48.85 coverage=95.9223300970874)
seg (db=Seg db_id=seg from=450 to=464)
ACD9_24_16

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comp(13000..13731)
DNA (732bp) protein (244aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
Glyco_tran_WecB (db=HMMPfam db_id=PF03808 from=51 to=211 evalue=1.3e-33 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
wecB_tagA_cpsF: glycosyl transferase, (db=HMMTigr db_id=TIGR00696 from=51 to=222 evalue=5.4e-26 interpro_id=IPR004629 interpro_description=Glycosyl transferase WecB/TagA/CpsF GO=Biological Process: biosynthetic process (GO:0009058))
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187); K05946 N-acetylglucosaminyldiphosphoundecaprenol [EC:2.4.1.187] alias=ACD9_62709.21054.9G0016,ACD9_62709.21054.9_16,ACD9_C00024G00016 id=137619 tax=ACD9 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
ACD9_24_17

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comp(13760..14299)
DNA (540bp) protein (180aa)
2'-5' RNA ligase
LigT-like (db=superfamily db_id=SSF55144 from=4 to=178 evalue=5.6e-30 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070))
2_5_ligase: 2'-5' RNA ligase (db=HMMTigr db_id=TIGR02258 from=7 to=178 evalue=1.7e-25 interpro_id=IPR004175 interpro_description=2',5' RNA ligase GO=Molecular Function: 2'-5'-RNA ligase activity (GO:0008664), Biological Process: RNA metabolic process (GO:0016070))
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=5 to=178 evalue=1.3e-20)
ACD9_24_18

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comp(14378..14746)
DNA (369bp) protein (123aa)
glyoxalase
Glyoxalase/bleomycin resistance protein n=1 Tax=uncultured bacterium RepID=D5MT87_9BACT (db=UNIREF evalue=8.0e-20 bit_score=99.4 identity=42.11 coverage=91.0569105691057)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=114 evalue=1.3e-14)
Glyoxalase (db=HMMPfam db_id=PF00903 from=4 to=110 evalue=1.7e-05 interpro_id=IPR004360 interpro_description=Glyoxalase/bleomycin resistance protein/dioxygenase)
ACD9_24_19

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14882..15169
DNA (288bp) protein (96aa)
14882..15169 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE18658.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_20

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comp(15309..16094)
DNA (786bp) protein (262aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=8 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE18659.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_21

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comp(16120..16899)
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=8 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE18660.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_22

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comp(16946..17632)
DNA (687bp) protein (229aa)
seg (db=Seg db_id=seg from=8 to=26)
seg (db=Seg db_id=seg from=50 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKE18661.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_23
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

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comp(17863..18135)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=2 to=25)
seg (db=Seg db_id=seg from=65 to=76)
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
ACD9_24_24

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comp(18122..18229)
DNA (108bp) protein (36aa)
seg (db=Seg db_id=seg from=23 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKE18651.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_25

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comp(18234..18971)
DNA (738bp) protein (246aa)
oxidoreductase, short chain dehydrogenase/reductase family protein
seg (db=Seg db_id=seg from=39 to=54)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=241 evalue=5.1e-62)
3-OXOACYL-(ACYL CARRIER PROTEIN) REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF85 from=2 to=241 evalue=8.6e-60)
ACD9_24_26

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comp(19078..19545)
DNA (468bp) protein (156aa)
19078..19545 - (rbs_motif=TAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE18653.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD9_24_27

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20065..20457
DNA (393bp) protein (131aa)
20065..20457 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE18650.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 27 items

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