ggKbase home page

gwa2_scaffold_5246

Alias: GWA2_UNK_27494

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwa2_scaffold_5246_1
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

3..1007
DNA (1005bp) protein (335aa)
modification methylase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
adenine-specific DNA methylase
PspGI methylase
gwa2_scaffold_5246_2
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(1004..1705)
DNA (702bp) protein (234aa)
glycosyl hydrolase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
glycosyl hydrolase
Putative uncharacterized protein
gwa2_scaffold_5246_3
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(1707..1955)
DNA (249bp) protein (83aa)
helix-turn-helix domain protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
helix-turn-helix domain protein
DNA-binding helix-turn-helix protein
gwa2_scaffold_5246_4

Not on your lists

1957..3087
DNA (1131bp) protein (377aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT41869.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
gwa2_scaffold_5246_5
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

3077..4396
DNA (1320bp) protein (440aa)
seg Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
Putative uncharacterized protein
gwa2_scaffold_5246_6
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4420..4641
DNA (222bp) protein (74aa)
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
infA; translation initiation factor IF-1
Translation initiation factor IF-1
gwa2_scaffold_5246_7
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


4782..5168
DNA (387bp) protein (129aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
30S ribosomal protein S13
30S ribosomal protein S13
gwa2_scaffold_5246_8
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


5247..5681
DNA (435bp) protein (145aa)
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
rpsK; 30S ribosomal protein S11
Ribosomal protein S11
gwa2_scaffold_5246_9
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


5762..6391
DNA (630bp) protein (210aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
30S ribosomal protein S4
30S ribosomal protein S4
gwa2_scaffold_5246_10

Not on your lists

6422..7354
DNA (933bp) protein (311aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKT41875.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
DNA-directed RNA polymerase subunit alpha
DNA-directed RNA polymerase subunit alpha
gwa2_scaffold_5246_11
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


7436..7786
DNA (351bp) protein (117aa)
LSU ribosomal protein L17p Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
LSU ribosomal protein L17p
50S ribosomal protein L17
gwa2_scaffold_5246_12
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


7791..8150
DNA (360bp) protein (120aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
50S ribosomal protein L13
50S ribosomal protein L13
gwa2_scaffold_5246_13
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


8134..8628
DNA (495bp) protein (165aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
30S ribosomal protein S9
Ribosomal protein S9
gwa2_scaffold_5246_14
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(8625..9194)
DNA (570bp) protein (190aa)
DNA polymerase V subunit; K03503 DNA polymerase V [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
repressor
LexA repressor
gwa2_scaffold_5246_15
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(9201..9407)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_16

Not on your lists

9669..10433
DNA (765bp) protein (255aa)
Transcriptional regulator of heat shock protein {ECO:0000313|EMBL:KKT41881.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
HrcA; transcriptional regulator of heat shock gene
Transcriptional regulator of heat shock gene
gwa2_scaffold_5246_17

Not on your lists

10430..10990
DNA (561bp) protein (187aa)
Protein GrpE {ECO:0000313|EMBL:KKT41882.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
molecular chaperone GrpE
Protein GrpE
gwa2_scaffold_5246_18

Not on your lists

11057..12940
DNA (1884bp) protein (628aa)
Chaperone protein DnaK {ECO:0000313|EMBL:KKT41883.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
molecular chaperone DnaK
Chaperone protein DnaK
gwa2_scaffold_5246_19
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

12946..13683
DNA (738bp) protein (246aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_20
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

13696..14451
DNA (756bp) protein (252aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_21

Not on your lists

14456..15529
DNA (1074bp) protein (358aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKT41886.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
chaperone protein dnaj
Chaperone protein DnaJ
gwa2_scaffold_5246_22
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

15631..16350
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
hypothetical protein
Putative uncharacterized protein
gwa2_scaffold_5246_23
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

16373..16663
DNA (291bp) protein (97aa)
id=3736896 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_24
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

16760..17884
DNA (1125bp) protein (375aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
tRNA-specific 2-thiouridylase MnmA
gwa2_scaffold_5246_25

Not on your lists

17897..18250
DNA (354bp) protein (118aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine-tRNA ligase {ECO:0000313|EMBL:KKT41890.1}; TaxID=1618830 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_44_13.;"
Suspect SCG annotation. See neighboring gene [gwa2_scaffold_5246_26].
Alanine--tRNA ligase
gwa2_scaffold_5246_26
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists


18360..19529
DNA (1170bp) protein (390aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
Alanine-tRNA ligase
Alanine--tRNA ligase
gwa2_scaffold_5246_27
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

19616..19795
DNA (180bp) protein (60aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_28
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

19862..21925
DNA (2064bp) protein (688aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
membrane protein
YYY membrane protein
gwa2_scaffold_5246_29
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22074..22349)
DNA (276bp) protein (92aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
gwa2_scaffold_5246_30
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(22346..22864)
DNA (519bp) protein (173aa)
seg 137..147 Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
Displaying items 1-30 of 36 in total

View Taxonomy