Alias: ACD18_38417.22030.23
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD18_18_1
uncultured bacterium, Bacteria
|
Not on your lists |
comp(699..2495)
|
threonyl-tRNA synthetase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B0 (db=UNIREF evalue=2.0e-174 bit_score=616.0 identity=50.0 coverage=96.661101836394)
threonyl-tRNA synthetase
threonyl-tRNA synthetase
thrS: threonyl-tRNA synthetase (db=HMMTigr db_id=TIGR00418 from=11 to=593 evalue=3.0e-259 interpro_id=IPR002320 interpro_description=Threonyl-tRNA synthetase, class IIa GO=Molecular Function: threonine-tRNA ligase activity (GO:0004829), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: threonyl-tRNA aminoacylation (GO:0006435))
|
|
ACD18_18_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(2983..4125)
|
hypothetical protein (db=KEGG evalue=3.0e-10 bit_score=69.7 identity=21.53 coverage=86.8766404199475)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
hypothetical protein alias=ACD18_C00018G00002,ACD18_38417.22030.23G0002,ACD18_38417.22030.23_2 id=12998 tax=ACD18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc= OD1
|
|
ACD18_18_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(4188..5921)
|
xpsE; Type II secretory pathway ATPase PulE/Tfp
General secretory pathway protein E n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ24_9FIRM (db=UNIREF evalue=3.0e-93 bit_score=346.0 identity=38.52 coverage=90.3114186851211)
seg (db=Seg db_id=seg from=323 to=334)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
|
|
ACD18_18_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(5968..6954)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=288 to=310)
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=283)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=208)
|
|
ACD18_18_5
uncultured bacterium, Bacteria
|
Not on your lists |
comp(7072..8076)
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=132)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
|
|
ACD18_18_6
uncultured bacterium, Bacteria
|
Not on your lists |
comp(8210..10075)
|
ftsH; cell division protein FtsH
ftsH; cell division protein FtsH
ATP-dependent metalloprotease FtsH n=1 Tax=Ammonifex degensii KC4 RepID=C9RA08_AMMDK (db=UNIREF evalue=1.0e-163 bit_score=580.0 identity=54.74 coverage=80.8681672025724)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=132)
|
|
ACD18_18_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
10397..10906
|
Nudix (db=superfamily db_id=SSF55811 from=21 to=157 evalue=1.7e-19 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=22 to=150 evalue=8.1e-13 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=23 to=137 evalue=1.2e-08 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=ProfileScan db_id=PS51462 from=20 to=166 evalue=10.259)
|
|
ACD18_18_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
11123..11683
|
seg (db=Seg db_id=seg from=116 to=133)
ADP-ribosylation (db=superfamily db_id=SSF56399 from=3 to=186 evalue=4.8e-13)
seg 116..133 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
|
|
ACD18_18_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
11982..12314
|
seg (db=Seg db_id=seg from=85 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
|
|
ACD18_18_10
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(12409..13059)
|
tsf; translation elongation factor Ts
EF_TS_2 (db=PatternScan db_id=PS01127 from=76 to=86 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=6 to=212 evalue=3.1e-61 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
tsf: translation elongation factor Ts (db=HMMTigr db_id=TIGR00116 from=1 to=216 evalue=2.6e-60 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
|
|
ACD18_18_11
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(13216..13947)
|
30S ribosomal protein S2
RIBOSOMAL_S2_1 (db=PatternScan db_id=PS00962 from=6 to=17 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsB_bact: ribosomal protein S2 (db=HMMTigr db_id=TIGR01011 from=3 to=227 evalue=7.2e-84 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal protein S2 (db=superfamily db_id=SSF52313 from=6 to=242 evalue=2.5e-75 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
|
|
ACD18_18_12
uncultured bacterium, Bacteria
|
Not on your lists |
14322..14708
|
mannose-6-phosphate isomerase
RmlC-like cupins (db=superfamily db_id=SSF51182 from=4 to=107 evalue=7.2e-22 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=32 to=100 evalue=1.2e-16 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=19 to=106 evalue=3.9e-12 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
|
|
ACD18_18_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
14792..15745
|
RhuM n=5 Tax=Coxiella burnetii RepID=A9KCJ8_COXBN (db=UNIREF evalue=3.0e-99 bit_score=365.0 identity=55.06 coverage=97.1698113207547)
death-on-curing family protein
death-on-curing family protein
coiled-coil (db=Coil db_id=coil from=180 to=208 evalue=NA)
|
|
ACD18_18_14
uncultured bacterium, Bacteria
|
Not on your lists |
15754..16380
|
HAD-superfamily hydrolase
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K409_9FIRM (db=UNIREF evalue=7.0e-13 bit_score=77.0 identity=28.96 coverage=85.1674641148325)
coiled-coil (db=Coil db_id=coil from=57 to=78 evalue=NA)
HAD-like (db=superfamily db_id=SSF56784 from=3 to=200 evalue=5.4e-29)
|
|
ACD18_18_15
uncultured bacterium, Bacteria
|
Not on your lists |
16392..16838
|
hypothetical protein
HIT-like (db=superfamily db_id=SSF54197 from=1 to=142 evalue=1.9e-14 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
HIT_2 (db=ProfileScan db_id=PS51084 from=6 to=108 evalue=8.947 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
hypothetical protein alias=ACD18_C00018G00015,ACD18_38417.22030.23G0015,ACD18_38417.22030.23_15 id=13000 tax=ACD18 species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc= OD1
|
|
ACD18_18_16
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
16852..17418
|
major facilitator superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=130 to=152)
|
|
ACD18_18_17
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
17423..17944
|
adenylyl cyclase
seg (db=Seg db_id=seg from=7 to=20)
coiled-coil (db=Coil db_id=coil from=78 to=99 evalue=NA)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=2 to=165 evalue=1.3e-24 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
|
|
ACD18_18_18
uncultured bacterium, Bacteria
|
Not on your lists |
17948..18883
|
hypothetical protein
seg (db=Seg db_id=seg from=48 to=57)
seg (db=Seg db_id=seg from=223 to=239)
coiled-coil (db=Coil db_id=coil from=225 to=246 evalue=NA)
|
|
ACD18_18_19
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
18893..19498
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BAQ8_9ACTO (db=UNIREF evalue=8.0e-19 bit_score=96.7 identity=28.57 coverage=96.5346534653465)
HAD-like (db=superfamily db_id=SSF56784 from=3 to=196 evalue=1.4e-29)
HADHALOGNASE (db=FPrintScan db_id=PR00413 from=97 to=110 evalue=9.7e-13 interpro_id=IPR005833 interpro_description=Haloacid dehydrogenase/epoxide hydrolase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: hydrolase activity (GO:0016787))
|
|
ACD18_18_20
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
19503..19952
|
seg (db=Seg db_id=seg from=73 to=92)
seg (db=Seg db_id=seg from=23 to=39)
Peptidase_C39 (db=HMMPfam db_id=PF03412 from=8 to=133 evalue=2.5e-12 interpro_id=IPR005074 interpro_description=Peptidase C39, bacteriocin processing GO=Molecular Function: ATP binding (GO:0005524), Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233), Cellular Component: integral to membrane (GO:0016021))
seg 73..92 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
|
|
ACD18_18_21
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(20000..20191)
|
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=6 to=63 evalue=2.5e-10)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=3 to=62 evalue=7.1e-09)
3FE4SFRDOXIN (db=FPrintScan db_id=PR00352 from=48 to=60 evalue=4.5e-05 interpro_id=IPR001080 interpro_description=3Fe-4S ferredoxin GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055))
3FE4SFRDOXIN (db=FPrintScan db_id=PR00352 from=19 to=29 evalue=4.5e-05 interpro_id=IPR001080 interpro_description=3Fe-4S ferredoxin GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055))
|
|
ACD18_18_22
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
|
Not on your lists |
20526..20846
|
50S ribosomal protein L31
seg (db=Seg db_id=seg from=78 to=101)
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=79 evalue=2.0e-25 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=83 evalue=1.8e-18)
|
|
ACD18_18_23
uncultured bacterium, Bacteria
|
Not on your lists |
21029..22069
|
prfA; peptide chain release factor 1
prfA; peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=RF1_THEYD (db=UNIREF evalue=3.0e-95 bit_score=352.0 identity=54.09 coverage=97.9827089337176)
seg (db=Seg db_id=seg from=280 to=294)
|