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ACD18_21

Alias: ACD18_1350.16600.23

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_21_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(36..203)
DNA (168bp) protein (56aa)
seg (db=Seg db_id=seg from=40 to=54)
seg (db=Seg db_id=seg from=13 to=33)
coiled-coil (db=Coil db_id=coil from=12 to=33 evalue=NA)
coiled-coil 12..33 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_21_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(242..1117)
DNA (876bp) protein (292aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9R4_9GAMM (db=UNIREF evalue=1.0e-11 bit_score=73.9 identity=27.46 coverage=63.6986301369863)
seg (db=Seg db_id=seg from=35 to=49)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=86 to=291 evalue=3.5e-27)
ACD18_21_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1250..1936)
DNA (687bp) protein (229aa)
hypothetical protein
seg (db=Seg db_id=seg from=6 to=39)
seg (db=Seg db_id=seg from=199 to=228)
hypothetical protein alias=ACD18_C00021G00003,ACD18_1350.16600.23G0003,ACD18_1350.16600.23_3 id=13039 tax=ACD18 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota organism_group=OD1, not OD1-i organism_desc= OD1
ACD18_21_4

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comp(2238..3689)
DNA (1452bp) protein (484aa)
hypothetical protein
seg (db=Seg db_id=seg from=260 to=276)
seg (db=Seg db_id=seg from=423 to=433)
coiled-coil (db=Coil db_id=coil from=214 to=277 evalue=NA)
ACD18_21_5

Not on your lists

3838..4155
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=69 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=83)
Uncharacterized protein {ECO:0000313|EMBL:EKE07533.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_21_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(4242..4469)
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions 49..71 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_21_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4807..5670
DNA (864bp) protein (288aa)
seg (db=Seg db_id=seg from=22 to=77)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
seg 22..77 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_21_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5749..6246)
DNA (498bp) protein (166aa)
greA: transcription elongation factor GreA
GreA_GreB (db=HMMPfam db_id=PF01272 from=95 to=164 evalue=3.7e-20 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
FKBP-like (db=superfamily db_id=SSF54534 from=91 to=164 evalue=4.2e-16)
no description (db=Gene3D db_id=G3DSA:3.10.50.30 from=87 to=164 evalue=3.4e-13 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD18_21_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6331..7323
DNA (993bp) protein (331aa)
seg (db=Seg db_id=seg from=222 to=231)
seg 222..231 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_21_10

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7457..9073
DNA (1617bp) protein (539aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BB21_CLOBO (db=UNIREF evalue=1.0e-99 bit_score=367.0 identity=49.88 coverage=74.7680890538034)
seg (db=Seg db_id=seg from=162 to=176)
ACD18_21_11
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9209..10120)
DNA (912bp) protein (304aa)
cell division protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=180 to=202)
ACD18_21_12
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10130..10810)
DNA (681bp) protein (227aa)
cell division protein FtsE
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=138 to=152 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
FtsE: cell division ATP-binding protein FtsE (db=HMMTigr db_id=TIGR02673 from=1 to=214 evalue=1.9e-107 interpro_id=IPR005286 interpro_description=Cell division ATP-binding protein FtsE GO=Molecular Function: ATP binding (GO:0005524), Biological Process: cell division (GO:0051301))
FILAMENTATION TEMPERATURE SENSITIVE CELL DIVISION PROTEIN FTSE (db=HMMPanther db_id=PTHR19222:SF36 from=2 to=223 evalue=1.3e-102)
ACD18_21_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11319..12428)
DNA (1110bp) protein (370aa)
prsA; peptidyl-prolyl isomerase (EC:5.2.1.8)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X300_9BACT (db=UNIREF evalue=1.0e-22 bit_score=110.0 identity=45.45 coverage=34.0540540540541)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
FKBP-like (db=superfamily db_id=SSF54534 from=190 to=294 evalue=9.7e-28)
ACD18_21_14
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12438..12866)
DNA (429bp) protein (143aa)
seg (db=Seg db_id=seg from=29 to=41)
seg (db=Seg db_id=seg from=95 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
DivIC (db=HMMPfam db_id=PF04977 from=26 to=100 evalue=2.8e-11 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
ACD18_21_15
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12986..13594)
DNA (609bp) protein (203aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=44)
seg (db=Seg db_id=seg from=50 to=66)
seg (db=Seg db_id=seg from=35 to=44)
ACD18_21_16
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13700..14848)
DNA (1149bp) protein (383aa)
group 1 glycosyl transferase
seg (db=Seg db_id=seg from=82 to=94)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=381 evalue=6.4e-67)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=3 to=373 evalue=3.5e-52)
ACD18_21_17

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comp(14916..16349)
DNA (1434bp) protein (478aa)
polysaccharide biosynthesis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=273)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
transmembrane_regions (db=TMHMM db_id=tmhmm from=331 to=352)
Displaying 17 items

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