Alias: ACD18_1371.18886.22
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD18_36_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
3..641
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ATP:cob(I)alamin adenosyltransferase
seg (db=Seg db_id=seg from=157 to=168)
1,3-PROPANEDIOL DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR12213 from=33 to=210 evalue=7.9e-65 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
PduO_Nterm: ATP:cob(I)alamin adenosyltrans (db=HMMTigr db_id=TIGR00636 from=36 to=211 evalue=1.8e-63 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
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ACD18_36_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(747..1538)
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glycosyl transferase family protein (EC:2.4.1.-)
seg (db=Seg db_id=seg from=252 to=262)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=4 to=193 evalue=4.5e-42)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=7 to=194 evalue=2.9e-36)
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ACD18_36_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(1602..2063)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=2 to=17)
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ACD18_36_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(2076..2480)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=120)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=104 to=115)
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ACD18_36_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(2485..2892)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=91 to=105)
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ACD18_36_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(2896..3258)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions 5..27 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
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ACD18_36_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(3398..3775)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions 7..24 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
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ACD18_36_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(3792..4868)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=135 to=146)
seg (db=Seg db_id=seg from=100 to=120)
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ACD18_36_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(4893..5297)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=6 to=21)
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ACD18_36_10
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(5425..5883)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=83 to=95)
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ACD18_36_11
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(5944..7182)
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seg (db=Seg db_id=seg from=78 to=98)
seg (db=Seg db_id=seg from=184 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=250)
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ACD18_36_12
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(7191..8450)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=385 to=407)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=281 to=298)
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ACD18_36_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(8454..9830)
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family 1 extracellular solute-binding protein
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=21 to=431 evalue=1.0e-39)
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=172 to=373 evalue=3.4e-21)
SBP_bac_1 (db=HMMPfam db_id=PF01547 from=52 to=369 evalue=5.9e-19 interpro_id=IPR006059 interpro_description=Bacterial extracellular solute-binding, family 1 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
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ACD18_36_14
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(10029..11720)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=537 to=559)
transmembrane_regions (db=TMHMM db_id=tmhmm from=502 to=524)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=501 to=511)
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ACD18_36_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(11742..12611)
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galU; UTP-glucose-1-phosphate uridylyltransferase
SUGAR-1-PHOSPHATE GUANYL TRANSFERASE (db=HMMPanther db_id=PTHR22572 from=13 to=283 evalue=6.5e-88)
GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE (db=HMMPanther db_id=PTHR22572:SF14 from=13 to=283 evalue=6.5e-88)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=283 evalue=2.3e-53)
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ACD18_36_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(12740..14068)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=297 to=308)
seg (db=Seg db_id=seg from=21 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKE07517.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD18_36_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(14118..14735)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=10 to=24)
Pili subunits (db=superfamily db_id=SSF54523 from=8 to=41 evalue=1.5e-08)
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Weak hits to pili genes
Jill Banfield
(11/15/12)
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ACD18_36_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(14831..16651)
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seg (db=Seg db_id=seg from=21 to=37)
seg (db=Seg db_id=seg from=188 to=197)
seg (db=Seg db_id=seg from=276 to=289)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
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May be a peptidase or pili-related
Jill Banfield
(11/15/12)
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ACD18_36_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(16658..17125)
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coiled-coil (db=Coil db_id=coil from=90 to=118 evalue=NA)
seg (db=Seg db_id=seg from=94 to=103)
Uncharacterized protein {ECO:0000313|EMBL:EKE07520.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD18_36_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(17320..17550)
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30S ribosomal protein S18
seg (db=Seg db_id=seg from=3 to=13)
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=19 to=71 evalue=7.4e-24 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=1 to=76 evalue=1.4e-22)
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ACD18_36_21
uncultured bacterium, Bacteria
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Not on your lists |
comp(17565..18005)
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hypothetical protein
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=146 evalue=2.0e-50 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=1 to=146 evalue=3.8e-46 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=3 to=142 evalue=5.6e-41 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD18_36_22
uncultured bacterium, Bacteria
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Not on your lists |
comp(18072..18695)
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30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BIN0_9PROT (db=UNIREF evalue=7.0e-11 bit_score=70.5 identity=36.78 coverage=41.3461538461538)
seg (db=Seg db_id=seg from=130 to=178)
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=8 to=105 evalue=8.8e-21 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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