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ACD18_41

Alias: ACD18_425.5690.22

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_41_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2..763)
DNA (762bp) protein (254aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (db=HMMPanther db_id=PTHR23135:SF5 from=114 to=251 evalue=1.3e-29)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=114 to=251 evalue=1.3e-29)
MurD Jill Banfield (11/15/12)
ACD18_41_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(767..1042)
DNA (276bp) protein (92aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
seg (db=Seg db_id=seg from=65 to=81)
transmembrane_regions 15..32 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_41_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1044..1697)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMA6_9BACT (db=UNIREF evalue=8.0e-21 bit_score=103.0 identity=32.84 coverage=92.2018348623853)
arginine-tRNA-protein transferase domain protein; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] (db=KEGG evalue=9.0e-21 bit_score=103.0 identity=32.85 coverage=90.8256880733945)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=52 to=205 evalue=1.5e-12 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ATE_C (db=HMMPfam db_id=PF04377 from=104 to=205 evalue=5.3e-06 interpro_id=IPR007472 interpro_description=Arginine-tRNA-protein transferase, C-terminal GO=Molecular Function: arginyltransferase activity (GO:0004057), Biological Process: protein arginylation (GO:0016598))
ACD18_41_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1710..2009)
DNA (300bp) protein (100aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=2 to=22)
transmembrane_regions 7..29 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_41_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2024..3154)
DNA (1131bp) protein (377aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
seg (db=Seg db_id=seg from=70 to=80)
seg (db=Seg db_id=seg from=31 to=42)
ACD18_41_6

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comp(3221..5191)
DNA (1971bp) protein (657aa)
biotin carboxylase-like protein (EC:6.4.1.2) (db=KEGG evalue=1.0e-09 bit_score=68.9 identity=23.58 coverage=30.7458143074581)
seg (db=Seg db_id=seg from=25 to=36)
coiled-coil (db=Coil db_id=coil from=339 to=360 evalue=NA)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=243 to=340 evalue=5.0e-07)
Fatty acid, propanoate, etc. Acetyl-CoA to malonyl-CoA Jill Banfield (11/15/12)
ACD18_41_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

5313..5729
DNA (417bp) protein (139aa)
5313..5729 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Displaying 7 items

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