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ACD18_51

Alias: ACD18_3123.4790.22

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_51_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1..123
DNA (123bp) protein (41aa)
LemA-like (db=superfamily db_id=SSF140478 from=1 to=29 evalue=3.6e-06)
LemA (db=HMMPfam db_id=PF04011 from=1 to=35 evalue=1.9e-05 interpro_id=IPR007156 interpro_description=LemA)
lemA; Protein LemA; K03744 LemA protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_51_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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174..545
DNA (372bp) protein (124aa)
hypothetical protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=19 to=110 evalue=1.4e-18 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
hypothetical protein alias=ACD18_3123.4790.22_2,ACD18_3123.4790.22G0002,ACD18_C00051G00002 id=13461 tax=ACD18 species=Brevundimonas subvibrioides genus=Brevundimonas taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc= OD1
ACD18_51_3

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654..1466
DNA (813bp) protein (271aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=152)
ACD18_51_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1474..2151
DNA (678bp) protein (226aa)
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei DSM 14684 RepID=D3F0S9_CONWI (db=UNIREF evalue=4.0e-09 bit_score=65.1 identity=31.13 coverage=65.929203539823)
seg (db=Seg db_id=seg from=170 to=182)
seg (db=Seg db_id=seg from=128 to=142)
ACD18_51_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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2157..2978
DNA (822bp) protein (274aa)
2157..2978 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_51_6

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3019..3780
DNA (762bp) protein (254aa)
short-chain dehydrogenase/reductase SDR
seg (db=Seg db_id=seg from=176 to=187)
17-BETA HYDROXYSTEROID DEHYDROGENASE (db=HMMPanther db_id=PTHR19410:SF38 from=3 to=228 evalue=2.8e-76)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=3 to=228 evalue=2.8e-76 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
ACD18_51_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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3825..4835
DNA (1011bp) protein (337aa)
coiled-coil (db=Coil db_id=coil from=124 to=172 evalue=NA)
coiled-coil (db=Coil db_id=coil from=211 to=235 evalue=NA)
seg (db=Seg db_id=seg from=154 to=164)
coiled-coil 124..172 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
Displaying 7 items

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