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ACD18_64

Alias: ACD18_307.15662.23

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_64_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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221..1477
DNA (1257bp) protein (419aa)
UPI0001D5AFFD related cluster n=1 Tax=unknown RepID=UPI0001D5AFFD (db=UNIREF evalue=2.0e-137 bit_score=492.0 identity=57.49 coverage=97.3747016706444)
enolase (EC:4.2.1.11)
enolase (EC:4.2.1.11)
ENOLASE (db=PatternScan db_id=PS00164 from=339 to=352 evalue=0.0 interpro_id=IPR020809 interpro_description=Enolase, conserved site GO=Cellular Component: phosphopyruvate hydratase complex (GO:0000015), Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: phosphopyruvate hydratase activity (GO:0004634), Biological Process: glycolysis (GO:0006096))
ACD18_64_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1596..3179
DNA (1584bp) protein (528aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Clostridia RepID=B9MS48_ANATD (db=UNIREF evalue=2.0e-128 bit_score=462.0 identity=46.5 coverage=95.8333333333333)
phosphoglyceromutase
phosphoglyceromutase
Cofactor-independent phosphoglycerate mutase (db=HMMPIR db_id=PIRSF001492 from=3 to=527 evalue=1.2e-201 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
ACD18_64_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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3285..4868
DNA (1584bp) protein (528aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Methanosaeta thermophila PT RepID=A0B5J2_METTP (db=UNIREF evalue=6.0e-114 bit_score=415.0 identity=44.04 coverage=94.6969696969697)
seg (db=Seg db_id=seg from=379 to=392)
ACD18_64_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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4897..7719
DNA (2823bp) protein (941aa)
seg (db=Seg db_id=seg from=454 to=461)
seg (db=Seg db_id=seg from=20 to=38)
seg (db=Seg db_id=seg from=107 to=125)
seg (db=Seg db_id=seg from=354 to=363)
ACD18_64_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(7747..8889)
DNA (1143bp) protein (381aa)
MGPA protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC5012 (db=UNIREF evalue=1.0e-25 bit_score=120.0 identity=29.72 coverage=69.0288713910761)
phosphoesterase RecJ domain-containing protein
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=16 to=371 evalue=1.4e-38)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=159 to=366 evalue=1.2e-14)
ACD18_64_6

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9219..12524
DNA (3306bp) protein (1102aa)
Valyl-tRNA synthetase n=1 Tax=Ammonifex degensii KC4 RepID=C9RB30_AMMDK (db=UNIREF evalue=1.0e-109 bit_score=402.0 identity=45.87 coverage=37.4773139745917)
valyl-tRNA synthetase
valyl-tRNA synthetase
coiled-coil (db=Coil db_id=coil from=1042 to=1063 evalue=NA)
ACD18_64_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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12528..13727
DNA (1200bp) protein (400aa)
seg (db=Seg db_id=seg from=310 to=320)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=229 to=396 evalue=4.4e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
HATPase_c (db=HMMPfam db_id=PF02518 from=253 to=397 evalue=6.2e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=229 to=340 evalue=0.00076 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD18_64_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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13762..14943
DNA (1182bp) protein (394aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase n=6 Tax=Thermotogaceae RepID=SYY_THEMA (db=UNIREF evalue=5.0e-98 bit_score=361.0 identity=45.97 coverage=96.1928934010152)
tyrS: tyrosyl-tRNA synthetase (db=HMMTigr db_id=TIGR00234 from=4 to=393 evalue=1.6e-93 interpro_id=IPR002307 interpro_description=Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tyrosine-tRNA ligase activity (GO:0004831), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tyrosyl-tRNA aminoacylation (GO:0006437))
ACD18_64_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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14948..15406
DNA (459bp) protein (153aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=77)
seg (db=Seg db_id=seg from=58 to=73)
transmembrane_regions 23..45 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_64_10
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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15412..15702
DNA (291bp) protein (97aa)
Arginyl-tRNA synthetase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK94_9FIRM (db=UNIREF evalue=9.0e-10 bit_score=65.9 identity=42.11 coverage=73.1958762886598)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] (db=KEGG evalue=5.0e-09 bit_score=63.2 identity=47.22 coverage=68.0412371134021)
Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain (db=superfamily db_id=SSF55190 from=1 to=94 evalue=2.7e-17 interpro_id=IPR005148 interpro_description=Arginyl tRNA synthetase, class Ic, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: arginine-tRNA ligase activity (GO:0004814), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: arginyl-tRNA aminoacylat
Arg_tRNA_synt_N (db=HMMPfam db_id=PF03485 from=3 to=81 evalue=1.7e-13 interpro_id=IPR005148 interpro_description=Arginyl tRNA synthetase, class Ic, N-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: arginine-tRNA ligase activity (GO:0004814), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: arginyl-tRNA aminoacylation (GO:0006420))
Displaying 10 items

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