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ACD18_83

Alias: ACD18_3623.14081.22

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_83_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

187..903
DNA (717bp) protein (239aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=42 to=63 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_83_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

909..1262
DNA (354bp) protein (118aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=92 to=105)
seg (db=Seg db_id=seg from=61 to=76)
ACD18_83_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1282..1734
DNA (453bp) protein (151aa)
hypothetical protein VspiD_09405 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744B81 (db=UNIREF evalue=9.0e-10 bit_score=65.9 identity=36.54 coverage=59.6026490066225)
seg (db=Seg db_id=seg from=7 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=146)
ACD18_83_4

Not on your lists

2897..4381
DNA (1485bp) protein (495aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQG2_ALIAD (db=UNIREF evalue=7.0e-136 bit_score=487.0 identity=48.33 coverage=95.7575757575758)
seg (db=Seg db_id=seg from=228 to=236)
ACD18_83_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4569..5417)
DNA (849bp) protein (283aa)
parB-like partition protein
seg (db=Seg db_id=seg from=88 to=101)
seg (db=Seg db_id=seg from=194 to=199)
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=30 to=211 evalue=7.8e-50 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
ACD18_83_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5544..6311)
DNA (768bp) protein (256aa)
chromosome segregation ATPase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=253 evalue=2.9e-70)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=249 evalue=6.1e-63)
CbiA (db=HMMPfam db_id=PF01656 from=5 to=221 evalue=1.9e-45 interpro_id=IPR002586 interpro_description=Cobyrinic acid a,c-diamide synthase)
ACD18_83_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6704..7675
DNA (972bp) protein (324aa)
putative phosphohydrolase
Ser/Thr phosphatase family protein n=1 Tax=Turicibacter sp. PC909 RepID=D4W3G8_9FIRM (db=UNIREF evalue=8.0e-24 bit_score=114.0 identity=28.68 coverage=78.3950617283951)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=43 to=57)
ACD18_83_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7804..8307)
DNA (504bp) protein (168aa)
Small multidrug export protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
ACD18_83_9
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8313..9362)
DNA (1050bp) protein (350aa)
peptidase M15
Penicillin-binding protein 7 n=1 Tax=beta proteobacterium KB13 RepID=B6BVC7_9PROT (db=UNIREF evalue=7.0e-22 bit_score=108.0 identity=31.18 coverage=73.4285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=21 to=33)
ACD18_83_10
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9431..9970)
DNA (540bp) protein (180aa)
scpB; segregation and condensation protein b
coiled-coil (db=Coil db_id=coil from=24 to=45 evalue=NA)
DUF387 (db=HMMPfam db_id=PF04079 from=6 to=160 evalue=2.4e-37 interpro_id=IPR005234 interpro_description=Chromosome segregation/condensation protein ScpB, prokaryote)
TIGR00281: segregation and condensation pro (db=HMMTigr db_id=TIGR00281 from=2 to=179 evalue=6.5e-24 interpro_id=IPR005234 interpro_description=Chromosome segregation/condensation protein ScpB, prokaryote)
ACD18_83_11
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10133..10834)
DNA (702bp) protein (234aa)
scpA; segregation and condensation protein A
Chromosome segregation and condensation protein n=1 Tax=uncultured crenarchaeote MCG RepID=B2YI87_9CREN (db=UNIREF evalue=4.0e-26 bit_score=121.0 identity=37.13 coverage=97.4358974358974)
seg (db=Seg db_id=seg from=16 to=24)
ScpA_ScpB (db=HMMPfam db_id=PF02616 from=22 to=231 evalue=3.1e-23 interpro_id=IPR003768 interpro_description=Prokaryotic chromosome segregation/condensation protein ScpA)
ACD18_83_12
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10824..11555)
DNA (732bp) protein (244aa)
glycosyl transferase family protein
seg (db=Seg db_id=seg from=207 to=220)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=202 evalue=1.9e-27)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=10 to=204 evalue=4.3e-22)
ACD18_83_13
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11559..13196)
DNA (1638bp) protein (546aa)
Putative uncharacterized protein n=2 Tax=Arthrospira RepID=B5VU24_SPIMA (db=UNIREF evalue=2.0e-15 bit_score=88.2 identity=22.73 coverage=91.5750915750916)
transmembrane_regions (db=TMHMM db_id=tmhmm from=368 to=386)
transmembrane_regions (db=TMHMM db_id=tmhmm from=339 to=361)
transmembrane_regions (db=TMHMM db_id=tmhmm from=310 to=329)
Displaying 13 items

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