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ACD18_89

Alias: ACD18_1427.10203.24

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_89_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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88..570
DNA (483bp) protein (161aa)
88..570 + (rbs_motif=TTAA rbs_spacer=5bp)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_89_2

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574..1155
DNA (582bp) protein (194aa)
Holliday junction DNA helicase RuvA
Holliday junction ATP-dependent DNA helicase ruvA n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GBB6_9FIRM (db=UNIREF evalue=7.0e-30 bit_score=133.0 identity=38.78 coverage=96.9072164948454)
ruvA: Holliday junction DNA helicase RuvA (db=HMMTigr db_id=TIGR00084 from=1 to=190 evalue=3.0e-43 interpro_id=IPR000085 interpro_description=Bacterial DNA recombination protein RuvA GO=Molecular Function: DNA helicase activity (GO:0003678), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
no description (db=Gene3D db_id=G3DSA:1.10.150.20 from=67 to=158 evalue=4.6e-20)
ACD18_89_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1363..1707
DNA (345bp) protein (115aa)
30S ribosomal protein S15
seg (db=Seg db_id=seg from=85 to=94)
seg (db=Seg db_id=seg from=96 to=114)
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=41 to=71 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD18_89_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1700..2257
DNA (558bp) protein (186aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=16 to=163 evalue=1.9e-34)
hypothetical protein Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
hypothetical protein alias=ACD18_1427.10203.24G0004,ACD18_1427.10203.24_4,ACD18_C00089G00004 id=13730 tax=ACD18 species=Halorhabdus utahensis genus=Halorhabdus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OD1, not OD1-i organism_desc= OD1
ACD18_89_5

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2447..4720
DNA (2274bp) protein (758aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=PNP_EXIS2 (db=UNIREF evalue=0.0 bit_score=692.0 identity=51.37 coverage=92.8759894459103)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
seg (db=Seg db_id=seg from=728 to=751)
ACD18_89_6

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comp(4775..5140)
DNA (366bp) protein (122aa)
seg (db=Seg db_id=seg from=90 to=99)
seg (db=Seg db_id=seg from=32 to=46)
Uncharacterized protein {ECO:0000313|EMBL:EKE07491.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_89_7
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(5207..5698)
DNA (492bp) protein (164aa)
hypothetical protein
seg (db=Seg db_id=seg from=8 to=15)
seg (db=Seg db_id=seg from=22 to=32)
L domain-like (db=superfamily db_id=SSF52058 from=43 to=142 evalue=8.2e-27)
ACD18_89_8
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(5709..6695)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=3 Tax=Bacillus RepID=C3ATJ7_BACMY (db=UNIREF evalue=2.0e-111 bit_score=405.0 identity=55.79 coverage=99.0881458966565)
LD-carboxypeptidase family protein
LD-carboxypeptidase family protein
Peptidase_S66 (db=HMMPfam db_id=PF02016 from=13 to=315 evalue=1.2e-77 interpro_id=IPR003507 interpro_description=Peptidase S66, LD-carboxypeptidase A)
ACD18_89_9

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7058..7297
DNA (240bp) protein (80aa)
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMD2_9RHIZ (db=UNIREF evalue=4.0e-18 bit_score=93.6 identity=54.43 coverage=96.25)
GIY-YIG (db=HMMPfam db_id=PF01541 from=1 to=66 evalue=1.3e-14 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=67 evalue=6.8e-11 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD18_89_10

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7505..8623
DNA (1119bp) protein (373aa)
Methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Idiomarina baltica OS145 RepID=A3WJA6_9GAMM (db=UNIREF evalue=1.0e-124 bit_score=449.0 identity=58.24 coverage=93.8337801608579)
seg (db=Seg db_id=seg from=4 to=16)
ACD18_89_11

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8826..10061
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q090U0_STIAU (db=UNIREF evalue=1.0e-58 bit_score=231.0 identity=38.54 coverage=89.0776699029126)
putative VCBS protein
seg (db=Seg db_id=seg from=5 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD18_89_12

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10157..10243
DNA (87bp) protein (29aa)
10157..10243 + (rbs_motif=TTAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE07497.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 12 items

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