ggKbase home page

ACD18_93

Alias: ACD18_6434.5280.22

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_93_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(130..768)
DNA (639bp) protein (213aa)
seg (db=Seg db_id=seg from=150 to=158)
seg 150..158 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_93_2

Not on your lists

864..2054
DNA (1191bp) protein (397aa)
tyrB; aromatic amino acid aminotransferase
coiled-coil (db=Coil db_id=coil from=306 to=327 evalue=NA)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=246 to=259 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ASPARTATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11879 from=1 to=396 evalue=8.8e-84 interpro_id=IPR000796 interpro_description=Aspartate/other aminotransferase GO=Biological Process: cellular amino acid metabolic process (GO:0006520), Molecular Function: transaminase activity (GO:0008483))
ACD18_93_3

Not on your lists

2077..2742
DNA (666bp) protein (222aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE06739.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_93_4

Not on your lists

2744..3268
DNA (525bp) protein (175aa)
Predicted protein n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFZ6_FUSMR (db=UNIREF evalue=5.0e-11 bit_score=70.5 identity=32.69 coverage=87.4285714285714)
seg (db=Seg db_id=seg from=122 to=133)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=41 to=174 evalue=1.1e-12 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=66 to=155 evalue=3.6e-06 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD18_93_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3271..3921
DNA (651bp) protein (217aa)
hypothetical protein UPF0073
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=124)
transmembrane_regions (db=TMHMM db_id=tmhmm from=131 to=153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
ACD18_93_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4123..4833
DNA (711bp) protein (237aa)
protein of unknown function DUF1003
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
DUF1003 (db=HMMPfam db_id=PF06210 from=112 to=218 evalue=1.6e-40 interpro_id=IPR010406 interpro_description=Protein of unknown function DUF1003)
Displaying 6 items

View Taxonomy