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ACD18_107

Alias: ACD18_232411.3474.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_107_1

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comp(2..121)
DNA (120bp) protein (40aa)
2..121 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE07220.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_107_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(329..1213)
DNA (885bp) protein (295aa)
RNA methylase
NOL1_NOP2_SUN (db=PatternScan db_id=PS01153 from=161 to=172 evalue=0.0 interpro_id=IPR018314 interpro_description=Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: methyltransferase activity (GO:0008168))
nop2p: NOL1/NOP2/sun family putative RNA met (db=HMMTigr db_id=TIGR00446 from=11 to=293 evalue=6.0e-60 interpro_id=IPR011023 interpro_description=Nop2p GO=Molecular Function: RNA binding (GO:0003723), Biological Process: rRNA processing (GO:0006364), Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757))
NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING (db=HMMPanther db_id=PTHR22807 from=48 to=293 evalue=1.1e-52)
ACD18_107_3

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comp(1342..1713)
DNA (372bp) protein (124aa)
signal peptidase I (EC:3.4.21.89)
SPASE_I_2 (db=PatternScan db_id=PS00760 from=40 to=52 evalue=0.0 interpro_id=IPR019757 interpro_description=Peptidase S26A, signal peptidase I, lysine active site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
SPASE_I_3 (db=PatternScan db_id=PS00761 from=86 to=99 evalue=0.0 interpro_id=IPR019758 interpro_description=Peptidase S26A, signal peptidase I, conserved site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
SIGNAL PEPTIDASE I (db=HMMPanther db_id=PTHR12383:SF1 from=1 to=115 evalue=6.5e-39)
ACD18_107_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1694..2128)
DNA (435bp) protein (145aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=121 to=131)
ACD18_107_5
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2403..2840)
DNA (438bp) protein (146aa)
hypothetical protein
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=1 to=144 evalue=6.3e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.450 from=1 to=144 evalue=2.4e-28)
Lysine_decarbox (db=HMMPfam db_id=PF03641 from=9 to=137 evalue=1.2e-27 interpro_id=IPR005269 interpro_description=Conserved hypothetical protein CHP00730)
ACD18_107_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2837..3508)
DNA (672bp) protein (224aa)
hypothetical protein
seg (db=Seg db_id=seg from=207 to=221)
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=1 to=136 evalue=4.5e-39)
Lysine_decarbox (db=HMMPfam db_id=PF03641 from=2 to=130 evalue=3.2e-33 interpro_id=IPR005269 interpro_description=Conserved hypothetical protein CHP00730)
Displaying 6 items

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