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ACD18_146

Alias: ACD18_1959.3108.21

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_146_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(55..600)
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor
seg (db=Seg db_id=seg from=47 to=59)
seg (db=Seg db_id=seg from=93 to=105)
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
ACD18_146_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(604..798)
DNA (195bp) protein (65aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=10 to=38 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=7 to=62 evalue=3.1e-21 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=7 to=63 evalue=7.8e-21 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD18_146_3
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1016..1303)
DNA (288bp) protein (96aa)
coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
coiled-coil 11..32 Tax=RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated
ACD18_146_4

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comp(1315..3147)
DNA (1833bp) protein (611aa)
gyrB; DNA gyrase subunit B
gyrB; DNA gyrase subunit B
DNA gyrase subunit B n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG8_THET1 (db=UNIREF evalue=7.0e-159 bit_score=564.0 identity=56.14 coverage=92.4713584288052)
seg (db=Seg db_id=seg from=33 to=42)
Displaying 4 items

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