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ACD18_149

Alias: ACD18_2975.4908.21

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD18_149_1
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(3..1004)
DNA (1002bp) protein (334aa)
hypothetical protein
seg (db=Seg db_id=seg from=167 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=18 to=35)
ACD18_149_2
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1149..1808)
DNA (660bp) protein (220aa)
50S ribosomal protein L25/general stress protein Ctc
seg (db=Seg db_id=seg from=204 to=219)
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=1 to=189 evalue=9.3e-43 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=5 to=180 evalue=1.1e-27 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
ACD18_149_3

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comp(1821..2171)
DNA (351bp) protein (117aa)
1821..2171 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE07055.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_149_4
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2454..3545)
DNA (1092bp) protein (364aa)
cell elongation-specific peptidoglycan biosynthesis regulator RodA
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=70)
ACD18_149_5

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comp(3552..4445)
DNA (894bp) protein (298aa)
seg (db=Seg db_id=seg from=35 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
Uncharacterized protein {ECO:0000313|EMBL:EKE07057.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD18_149_6
RIFOXYD12_FULL_OD1_Magasanikbacteria_33_17_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4660..4953
DNA (294bp) protein (98aa)
gyrB; DNA gyrase subunit B
DNA GYRASE SUBUNIT B (db=HMMPanther db_id=PTHR10169:SF3 from=29 to=98 evalue=5.6e-37)
DNA TOPOISOMERASE/GYRASE (db=HMMPanther db_id=PTHR10169 from=29 to=98 evalue=5.6e-37)
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=7 to=98 evalue=1.4e-30 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
fragment Jill Banfield (11/15/12)
Displaying 6 items

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