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gwf2_scaffold_599

Alias: PER_GWF2_39_17_8

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_599_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

177..2465
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6W8L7_PANSA
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
seg (db=Seg db_id=seg from=244 to=263)
gwf2_scaffold_599_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

2523..2783
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBZ5_9CHLR
hypothetical protein; K02221 YggT family protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_599_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

2799..4193
DNA (1395bp) protein (465aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=PER_GWF2_39_17
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKU9_CLOSH rbh
cysS: cysteinyl-tRNA synthetase (db=HMMTigr db_id=TIGR00435 from=3 to=464 evalue=1.7e-202 interpro_id=IPR015803 interpro_description=Cysteinyl-tRNA synthetase GO=Molecular Function: cysteine-tRNA ligase activity (GO:0004817), Molecular Function: ATP binding (GO:0005524), Biological Process: cysteinyl-tRNA aminoacylation (GO:0006423))
gwf2_scaffold_599_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4204..4623)
DNA (420bp) protein (140aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=125 to=139)
gwf2_scaffold_599_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4677..5639)
DNA (963bp) protein (321aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_599_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(5691..6428)
DNA (738bp) protein (246aa)
PROKAR_LIPOPROTEIN Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=116 to=127)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=24 evalue=5.0)
gwf2_scaffold_599_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(6473..7762)
DNA (1290bp) protein (430aa)
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=PER_GWF2_39_17
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium arbusti SL206 RepID=UPI000287FC45
(db=HMMPfam db_id=PF01225 from=2 to=101 evalue=1.6e-16 interpro_id=IPR000713 interpro_description=Mur ligase, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Biological Process: biosynthetic process (GO:0009058))
gwf2_scaffold_599_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

7875..8294
DNA (420bp) protein (140aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
(db=HMMPfam db_id=PF04977 from=22 to=97 evalue=1.1e-11 interpro_id=IPR007060 interpro_description=Septum formation initiator GO=Biological Process: cell cycle (GO:0007049))
gwf2_scaffold_599_9
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

8307..8480
DNA (174bp) protein (58aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
gwf2_scaffold_599_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8843..10036)
DNA (1194bp) protein (398aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R3B0_SPISS
cell envelope-related transcriptional attenuator Tax=PER_GWF2_39_17
cell envelope-related transcriptional attenuator
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=54)
gwf2_scaffold_599_11
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(10044..12647)
DNA (2604bp) protein (868aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT
ATPase Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_599_12
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12805..14229)
DNA (1425bp) protein (475aa)
peptidase M50 family protein; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=PER_GWF2_39_17
Peptidase M50 family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I011_CALAS
peptidase M50 family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
gwf2_scaffold_599_13
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(14283..14843)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RRF_CARHZ
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=PER_GWF2_39_17
frr; ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=133 to=182 evalue=NA)
gwf2_scaffold_599_14
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(14929..15639)
DNA (711bp) protein (237aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=PER_GWF2_39_17
Uridylate kinase n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GP95_9FUSO
hypothetical protein
Uridylate kinase (db=HMMPIR db_id=PIRSF005650 from=1 to=235 evalue=1.9e-105 interpro_id=IPR011817 interpro_description=Uridylate kinase GO=Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221), Molecular Function: uridylate kinase activity (GO:0009041))
gwf2_scaffold_599_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(15636..16031)
DNA (396bp) protein (132aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=112 to=129)
seg (db=Seg db_id=seg from=43 to=56)
gwf2_scaffold_599_16
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(16056..16952)
DNA (897bp) protein (299aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B4C6_TURPD
putative cAMP-dependent protein kinase Tax=PER_GWF2_39_17
putative transcriptional regulator, Crp/Fnr family
CNMP_BINDING_2 (db=PatternScan db_id=PS00889 from=86 to=103 evalue=0.0 interpro_id=IPR018488 interpro_description=Cyclic nucleotide-binding, conserved site)
gwf2_scaffold_599_17
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(16945..18039)
DNA (1095bp) protein (365aa)
Twitching motility protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ23_9FIRM rbh
pilT; type IV pilus retraction protein PilT; K02669 twitching motility protein PilT Tax=PER_GWF2_39_17
pilT; type IV pilus retraction protein PilT
T2SP_E (db=PatternScan db_id=PS00662 from=195 to=209 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
gwf2_scaffold_599_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

18127..18846
DNA (720bp) protein (240aa)
Metal-dependent phosphohydrolase, HD domain Tax=PER_GWF2_39_17
no description (db=HMMSmart db_id=SM00471 from=26 to=170 evalue=0.0011 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_599_19
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18876..20525)
DNA (1650bp) protein (550aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR08179.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=517 to=547 evalue=0.00026)
seg (db=Seg db_id=seg from=227 to=241)
gwf2_scaffold_599_20
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(20540..20812)
DNA (273bp) protein (91aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
gwf2_scaffold_599_21
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(20830..21774)
DNA (945bp) protein (315aa)
Epidermal growth factor receptor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9K3K7_9DELT
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
gwf2_scaffold_599_22
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

21918..22775
DNA (858bp) protein (286aa)
Transcriptional regulator, TrmB n=1 Tax=sediment metagenome RepID=D9PL89_9ZZZZ
transcriptional regulator TrmB Tax=PER_GWF2_39_17
Transcriptional regulator, TrmB
(db=HMMPfam db_id=PF01978 from=24 to=93 evalue=6.0e-12 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
gwf2_scaffold_599_23
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(22731..23420)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB08_METEZ
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
gwf2_scaffold_599_24
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(23521..23868)
DNA (348bp) protein (116aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_599_25
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(23903..24067)
DNA (165bp) protein (55aa)
Tax=PER_GWF2_39_17
gwf2_scaffold_599_26
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

24233..25996
DNA (1764bp) protein (588aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V162_ROSS1
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
POMP_repeat: Chlamydial polymorphic outer (db=HMMTigr db_id=TIGR01376 from=230 to=257 evalue=0.052 interpro_id=IPR003368 interpro_description=Polymorphic outer membrane protein repeat)
gwf2_scaffold_599_27
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(26045..26599)
DNA (555bp) protein (185aa)
CBS domain containing protein n=2 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FCH3_SACEN
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwf2_scaffold_599_28
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

26781..28754
DNA (1974bp) protein (658aa)
Outer membrane protein (Fragment) n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VLS6_9SPHI
cadherin Tax=PER_GWF2_39_17
cadherin
seg (db=Seg db_id=seg from=15 to=28)
gwf2_scaffold_599_29
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(29514..30377)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QWR9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KKR24075.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
seg (db=Seg db_id=seg from=78 to=90)
gwf2_scaffold_599_30
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

comp(30687..32321)
DNA (1635bp) protein (545aa)
60 kDa chaperonin n=4 Tax=Paenibacillus RepID=K4ZR50_PAEAL rbh
Chaperonin GroEL, chaperonin GroEL {ECO:0000313|EMBL:KKR24074.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
chaperonin GroEL
CHAPERONINS_CPN60 (db=PatternScan db_id=PS00296 from=404 to=415 evalue=0.0 interpro_id=IPR018370 interpro_description=Chaperonin Cpn60, conserved site GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
Displaying items 1-30 of 67 in total

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