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ACDOP11_13

Alias: ACDOP11_4660.11541.27

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_13_1

Not on your lists

comp(3..329)
DNA (327bp) protein (109aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
seg (db=Seg db_id=seg from=61 to=76)
Competence (db=HMMPfam db_id=PF03772 from=1 to=102 evalue=4.2e-13 interpro_id=IPR004477 interpro_description=ComEC/Rec2-related protein)
ACDOP11_13_2
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(338..1114)
DNA (777bp) protein (259aa)
comEC; DNA internalization competence protein; K02238 competence protein ComEC (db=KEGG evalue=1.0e-33 bit_score=147.0 identity=35.02 coverage=89.1891891891892)
seg (db=Seg db_id=seg from=8 to=22)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=22 to=258 evalue=2.6e-38)
Lactamase_B (db=HMMPfam db_id=PF00753 from=39 to=198 evalue=1.8e-08)
ACDOP11_13_3
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(1465..2697)
DNA (1233bp) protein (411aa)
processing protease (db=KEGG evalue=5.0e-56 bit_score=221.0 identity=32.16 coverage=94.8905109489051)
INSULINASE (db=PatternScan db_id=PS00143 from=20 to=43 evalue=0.0 interpro_id=IPR001431 interpro_description=Peptidase M16, zinc-binding site GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
METALLOPROTEASE (db=HMMPanther db_id=PTHR11851 from=15 to=408 evalue=1.2e-73)
no description (db=Gene3D db_id=G3DSA:3.30.830.10 from=2 to=197 evalue=1.3e-45 interpro_id=IPR011237 interpro_description=Peptidase M16, core GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: metal ion binding (GO:0046872))
ACDOP11_13_4

Not on your lists

comp(3257..3427)
DNA (171bp) protein (57aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=33)
Uncharacterized protein {ECO:0000313|EMBL:EKD53068.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACDOP11_13_5

Not on your lists

comp(3514..4203)
DNA (690bp) protein (230aa)
seg (db=Seg db_id=seg from=132 to=146)
ACDOP11_13_6
unknown

Not on your lists

comp(5387..5617)
DNA (231bp) protein (77aa)
seg (db=Seg db_id=seg from=65 to=74)
ACDOP11_13_7
unknown

Not on your lists

comp(5687..6091)
DNA (405bp) protein (135aa)

This feature has no annotations

ACDOP11_13_8
unknown

Not on your lists

comp(6137..6376)
DNA (240bp) protein (80aa)

This feature has no annotations

ACDOP11_13_9
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(6478..6573)
DNA (96bp) protein (32aa)
hypothetical protein Tax=GWA2_OP11_42_17
ACDOP11_13_10
unknown

Not on your lists

comp(6665..6874)
DNA (210bp) protein (70aa)
seg (db=Seg db_id=seg from=22 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
ACDOP11_13_11
unknown

Not on your lists

comp(6902..7135)
DNA (234bp) protein (78aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
ACDOP11_13_12
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(7107..7778)
DNA (672bp) protein (224aa)
DNA protecting protein DprA; K04096 DNA processing protein (db=KEGG evalue=1.0e-36 bit_score=155.0 identity=42.11 coverage=91.0714285714286)
DNA_processg_A (db=HMMPfam db_id=PF02481 from=5 to=203 evalue=2.9e-60 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=1 to=212 evalue=1.8e-28)
UniRef90_K1ZDM7 Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZDM7_9BACT alias=RAAC19_AAC14_scaffold_1400_22,RAAC19_C00016G00022 id=699659 tax=RAAC19 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
ACDOP11_13_13
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(8031..8498)
DNA (468bp) protein (156aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] (db=KEGG evalue=2.0e-32 bit_score=140.0 identity=53.96 coverage=88.4615384615385)
seg (db=Seg db_id=seg from=28 to=38)
NDP_KINASES (db=PatternScan db_id=PS00469 from=112 to=120 evalue=0.0 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=HMMSmart db_id=SM00562 from=1 to=138 evalue=7.6e-64 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACDOP11_13_14

Not on your lists

comp(8775..9434)
DNA (660bp) protein (220aa)

This feature has no annotations

ACDOP11_13_15
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(9412..9936)
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS43238.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
ACDOP11_13_16
unknown

Not on your lists

comp(10070..10225)
DNA (156bp) protein (52aa)

This feature has no annotations

ACDOP11_13_17
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(10289..10582)
DNA (294bp) protein (98aa)
seg (db=Seg db_id=seg from=68 to=91)
Uncharacterized protein {ECO:0000313|EMBL:KKS43238.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
ACDOP11_13_18
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(11285..11593)
DNA (309bp) protein (103aa)
rod shape-determining protein Mbl; K03569 rod shape-determining protein MreB and related proteins (db=KEGG evalue=2.0e-20 bit_score=100.0 identity=61.76 coverage=97.0873786407767)
seg (db=Seg db_id=seg from=19 to=35)
MreB_Mbl (db=HMMPfam db_id=PF06723 from=7 to=103 evalue=7.7e-38 interpro_id=IPR004753 interpro_description=Cell shape determining protein MreB/Mrl GO=Biological Process: cell morphogenesis (GO:0000902))
no description (db=Gene3D db_id=G3DSA:3.30.420.40 from=4 to=103 evalue=2.0e-29)
Displaying 18 items

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