ggKbase home page

ACDOP11_25

Alias: ACDOP11_4299.18139.25

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_25_1

Not on your lists

comp(2..451)
DNA (450bp) protein (150aa)
zf-C4_Topoisom (db=HMMPfam db_id=PF01396 from=30 to=49 evalue=6.1e-05 interpro_id=IPR013498 interpro_description=DNA topoisomerase, type IA, zn finger GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
ACDOP11_25_2
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(554..988)
DNA (435bp) protein (145aa)
coiled-coil (db=Coil db_id=coil from=79 to=100 evalue=NA)
coiled-coil (db=Coil db_id=coil from=114 to=142 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
ACDOP11_25_3
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(985..1302)
DNA (318bp) protein (106aa)
methylated-DNA--protein-cysteine methyltransferase
MGMT (db=PatternScan db_id=PS00374 from=52 to=58 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=3 to=86 evalue=1.1e-29 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10815 from=4 to=100 evalue=6.7e-29 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACDOP11_25_4
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(1299..1910)
DNA (612bp) protein (204aa)
hypothetical protein Tax=GWA2_OP11_42_17
ACDOP11_25_5
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(1969..3114)
DNA (1146bp) protein (382aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2) (db=KEGG evalue=2.0e-96 bit_score=355.0 identity=54.77 coverage=83.5078534031414)
Glucose sorbosone dehydrogenase n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R200_9DELT (db=UNIREF evalue=8.0e-92 bit_score=340.0 identity=49.86 coverage=87.9581151832461)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
ACDOP11_25_6
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(3124..3345)
DNA (222bp) protein (74aa)
hypothetical protein Tax=GWA2_OP11_42_17
ACDOP11_25_7
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(3408..4091)
DNA (684bp) protein (228aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=24 to=169 evalue=9.3e-12)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=95 to=166 evalue=4.6e-10 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=61 to=169 evalue=2.2e-08)
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108 from=47 to=164 evalue=0.00029)
ACDOP11_25_8
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

comp(4196..5488)
DNA (1293bp) protein (431aa)
putative Ferredoxin--NAD(+) reductase (EC:1.18.1.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=169)
seg (db=Seg db_id=seg from=7 to=22)
seg (db=Seg db_id=seg from=311 to=318)
ACDOP11_25_9
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

comp(5485..5871)
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=120)
seg (db=Seg db_id=seg from=67 to=82)
seg (db=Seg db_id=seg from=101 to=116)
ACDOP11_25_10
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(6160..6519)
DNA (360bp) protein (120aa)
coiled-coil (db=Coil db_id=coil from=22 to=43 evalue=NA)
ACDOP11_25_11
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(6658..6840)
DNA (183bp) protein (61aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Putative uncharacterized protein Tax=GWA2_OP11_42_17
ACDOP11_25_12
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(6875..7627)
DNA (753bp) protein (251aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=6 to=250 evalue=4.1e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=7 to=249 evalue=5.2e-12)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=48 to=140 evalue=2.8e-07 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACDOP11_25_13
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria

Not on your lists

comp(7827..8897)
DNA (1071bp) protein (357aa)
recombination factor protein RarA; K07478 putative ATPase (db=KEGG evalue=5.0e-96 bit_score=354.0 identity=48.94 coverage=99.4397759103641)
AAA ATPase central domain protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5P7_GEOSF (db=UNIREF evalue=5.0e-96 bit_score=354.0 identity=48.94 coverage=99.4397759103641)
WERNER HELICASE INTERACTING PROTEIN (db=HMMPanther db_id=PTHR13779:SF1 from=1 to=356 evalue=1.1e-152)
ACDOP11_25_14
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(8919..9371)
DNA (453bp) protein (151aa)
dtd; D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-); K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] (db=KEGG evalue=3.0e-30 bit_score=133.0 identity=45.64 coverage=96.6887417218543)
DTD-like (db=superfamily db_id=SSF69500 from=1 to=147 evalue=9.6e-42 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472 from=1 to=148 evalue=1.6e-40 interpro_id=IPR003732 interpro_description=D-tyrosyl-tRNA(Tyr) deacylase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Biological Process: D-amino acid catabolic process (GO:0019478))
D-TYROSYL-TRNA(TYR) DEACYLASE (db=HMMPanther db_id=PTHR10472:SF4 from=1 to=148 evalue=1.6e-40)
ACDOP11_25_15

Not on your lists

comp(9368..9646)
DNA (279bp) protein (93aa)
seg (db=Seg db_id=seg from=6 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACDOP11_25_16

Not on your lists

comp(9643..10119)
DNA (477bp) protein (159aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACDOP11_25_17
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists


comp(10251..12350)
DNA (2100bp) protein (700aa)
lon; ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] (db=KEGG evalue=2.0e-142 bit_score=509.0 identity=45.03 coverage=90.1428571428572)
seg (db=Seg db_id=seg from=647 to=659)
seg (db=Seg db_id=seg from=236 to=262)
seg (db=Seg db_id=seg from=197 to=211)
ACDOP11_25_18
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists


comp(12410..12628)
DNA (219bp) protein (73aa)
lonA; class III heat-shock ATP-dependent LonA protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] (db=KEGG evalue=8.0e-18 bit_score=92.4 identity=58.33 coverage=97.2602739726027)
Lon_C (db=HMMPfam db_id=PF05362 from=1 to=69 evalue=1.1e-27 interpro_id=IPR008269 interpro_description=Peptidase S16, Lon C-terminal GO=Molecular Function: ATP-dependent peptidase activity (GO:0004176), Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
ATP DEPENDENT LON PROTEASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10046 from=1 to=72 evalue=2.7e-24)
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=1 to=68 evalue=8.6e-20 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
ACDOP11_25_19
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(12603..13277)
DNA (675bp) protein (225aa)
Prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MRY5_9FIRM (db=UNIREF evalue=2.0e-20 bit_score=102.0 identity=35.58 coverage=85.3333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=80 to=91)
ACDOP11_25_20
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(13270..14505)
DNA (1236bp) protein (412aa)
prolyl-tRNA synthetase
PROLYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11451:SF3 from=36 to=411 evalue=1.2e-118)
TRNA SYNTHETASE-RELATED (db=HMMPanther db_id=PTHR11451 from=36 to=411 evalue=1.2e-118)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=7 to=326 evalue=4.8e-63)
ACDOP11_25_21
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(14521..15228)
DNA (708bp) protein (236aa)
putative Zinc/iron permease
Zinc/iron permease n=1 Tax=Gallionella capsiferriformans ES-2 RepID=C5V134_9PROT (db=UNIREF evalue=5.0e-32 bit_score=141.0 identity=36.59 coverage=95.7627118644068)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
ACDOP11_25_22
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(15629..16222)
DNA (594bp) protein (198aa)
putative nuclease (db=KEGG evalue=3.0e-40 bit_score=167.0 identity=43.09 coverage=87.8787878787879)
seg (db=Seg db_id=seg from=180 to=197)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=4 to=136 evalue=1.2e-20 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:3.40.91.40 from=1 to=136 evalue=1.0e-18 interpro_id=IPR012311 interpro_description=Nuclease, putative, AF1548, N-terminal)
ACDOP11_25_23
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(16215..16586)
DNA (372bp) protein (124aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
ACDOP11_25_24
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(16589..16858)
DNA (270bp) protein (90aa)
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKS42684.1}; TaxID=1618378 species="Bacteria; Microgenomates.;" source="Microgenomates (Collierbacteria) bacterium GW2011_GWA2_42_17.;"
ACDOP11_25_25
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(16917..17525)
DNA (609bp) protein (203aa)
hypothetical protein (db=KEGG evalue=3.0e-17 bit_score=91.3 identity=37.93 coverage=81.2807881773399)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=195 evalue=4.2e-11)
CoaE (db=HMMPfam db_id=PF01121 from=4 to=62 evalue=1.7e-05 interpro_id=IPR001977 interpro_description=Dephospho-CoA kinase GO=Molecular Function: dephospho-CoA kinase activity (GO:0004140), Molecular Function: ATP binding (GO:0005524), Biological Process: coenzyme A biosynthetic process (GO:0015937))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=188 evalue=8.8e-05)
ACDOP11_25_26
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(17526..17837)
DNA (312bp) protein (104aa)
hypothetical protein Tax=GWA2_OP11_42_17
ACDOP11_25_27
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(17866..18183)
DNA (318bp) protein (106aa)
TrmH family RNA methyltransferase
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=3 to=105 evalue=6.6e-23)
RNA-METHYLASE-RELATED (db=HMMPanther db_id=PTHR12029:SF8 from=3 to=105 evalue=6.6e-23)
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=104 evalue=1.9e-22)
Displaying 27 items

View Taxonomy