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ACDOP11_33

Alias: ACDOP11_37791.21023.10

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_33_1
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(170..667)
DNA (498bp) protein (166aa)
recX; regulatory protein RecX
seg (db=Seg db_id=seg from=86 to=98)
RecX (db=HMMPfam db_id=PF02631 from=37 to=156 evalue=4.0e-25 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
RecX (db=HAMAP db_id=MF_01114 from=3 to=161 evalue=15.123)
ACDOP11_33_2
GWA2_OP11_nov_40_8, Levybacteria, Microgenomates, Bacteria

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comp(645..1727)
DNA (1083bp) protein (361aa)
recA; Protein RecA
recA; Protein RecA
Protein recA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ACX3_CARHZ (db=UNIREF evalue=4.0e-122 bit_score=441.0 identity=69.18 coverage=83.9335180055402)
seg (db=Seg db_id=seg from=324 to=339)
ACDOP11_33_3
ACD13, ACD13, ACD13, ACD13, Microgenomates, Bacteria

Not on your lists

comp(1919..2671)
DNA (753bp) protein (251aa)
undecaprenyl pyrophosphate synthase; K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] (db=KEGG evalue=8.0e-36 bit_score=153.0 identity=37.55 coverage=88.0478087649402)
DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR10291 from=14 to=245 evalue=1.0e-51 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
no description (db=Gene3D db_id=G3DSA:3.40.1180.10 from=6 to=243 evalue=1.1e-47 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
Prenyltransf (db=HMMPfam db_id=PF01255 from=29 to=243 evalue=2.6e-47 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
ACDOP11_33_4
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3884..4807)
DNA (924bp) protein (308aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTC5_9GAMM (db=UNIREF evalue=8.0e-39 bit_score=164.0 identity=37.81 coverage=89.2857142857143)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] (db=KEGG evalue=6.0e-38 bit_score=161.0 identity=35.92 coverage=89.2857142857143)
seg (db=Seg db_id=seg from=129 to=145)
LYTB (db=HMMPfam db_id=PF02401 from=6 to=271 evalue=5.0e-57 interpro_id=IPR003451 interpro_description=LytB protein GO=Biological Process: isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway (GO:0019288), Biological Process: oxidation reduction (GO:0055114))
ACDOP11_33_5
Rodentia, Mammalia, Chordata, Metazoa

Not on your lists

comp(4812..5354)
DNA (543bp) protein (181aa)
Idi1, 4832416K17Rik, MGC118013, MGC8139; isopentenyl-diphosphate delta isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] (db=KEGG evalue=2.0e-08 bit_score=61.6 identity=29.73 coverage=91.7127071823204)
Isopentenyl-diphosphate Delta-isomerase 1 n=4 Tax=Muroidea RepID=IDI1_MOUSE (db=UNIREF evalue=3.0e-08 bit_score=61.2 identity=29.73 coverage=91.7127071823204)
Nudix (db=superfamily db_id=SSF55811 from=10 to=180 evalue=2.8e-07 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=36 to=176 evalue=0.00082 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACDOP11_33_6
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(5351..5782)
DNA (432bp) protein (144aa)
rpsI; 30S ribosomal protein S9
seg (db=Seg db_id=seg from=17 to=29)
RIBOSOMAL_S9 (db=PatternScan db_id=PS00360 from=81 to=99 evalue=0.0 interpro_id=IPR020574 interpro_description=Ribosomal protein S9, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S9 (db=HMMPfam db_id=PF00380 from=19 to=143 evalue=1.3e-30 interpro_id=IPR000754 interpro_description=Ribosomal protein S9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_7
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria

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comp(5754..6170)
DNA (417bp) protein (139aa)
50S ribosomal protein L13
rplM_bact: ribosomal protein L13 (db=HMMTigr db_id=TIGR01066 from=1 to=134 evalue=2.2e-54 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L13 (db=HMMPanther db_id=PTHR11545 from=2 to=133 evalue=7.0e-47 interpro_id=IPR005822 interpro_description=Ribosomal protein L13 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L13 (db=HMMPanther db_id=PTHR11545:SF2 from=2 to=133 evalue=7.0e-47 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_8
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(6167..6643)
DNA (477bp) protein (159aa)
RplQ; 50S ribosomal protein L17
seg (db=Seg db_id=seg from=111 to=153)
RIBOSOMAL_L17 (db=PatternScan db_id=PS01167 from=34 to=56 evalue=0.0 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L17 (db=HMMPanther db_id=PTHR14413:SF3 from=1 to=158 evalue=2.5e-24)
ACDOP11_33_9
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(6670..7185)
DNA (516bp) protein (172aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
seg (db=Seg db_id=seg from=153 to=168)
no description (db=Gene3D db_id=G3DSA:3.30.1360.10 from=1 to=89 evalue=4.6e-19)
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=108 to=164 evalue=2.7e-16 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350))
ACDOP11_33_10
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(7651..8253)
DNA (603bp) protein (201aa)
30S ribosomal protein S4
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=92 to=116 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843))
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=200 evalue=7.5e-87 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=200 evalue=2.3e-59)
ACDOP11_33_11
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(8257..8649)
DNA (393bp) protein (131aa)
30S ribosomal protein S11
seg (db=Seg db_id=seg from=3 to=13)
RIBOSOMAL_S11 (db=PatternScan db_id=PS00054 from=98 to=120 evalue=0.0 interpro_id=IPR018102 interpro_description=Ribosomal S11, conserved site)
Ribosomal protein, S11p/S11a/S14e/organellar S11 types (db=HMMPIR db_id=PIRSF002131 from=1 to=130 evalue=6.7e-70 interpro_id=IPR001971 interpro_description=Ribosomal protein S11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_12
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria

Not on your lists


comp(8649..9053)
DNA (405bp) protein (135aa)
rpsM; 30S ribosomal protein S13
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
RIBOSOMAL_S13_1 (db=PatternScan db_id=PS00646 from=86 to=99 evalue=0.0 interpro_id=IPR018269 interpro_description=Ribosomal protein S13, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=2 to=113 evalue=5.3e-58 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_13
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9167..9382)
DNA (216bp) protein (72aa)
infA; translation initiation factor IF-1
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=3 to=71 evalue=1.0e-34 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=71 evalue=5.0e-27 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
eIF-1a (db=HMMPfam db_id=PF01176 from=7 to=70 evalue=1.6e-25 interpro_id=IPR006196 interpro_description=S1, IF1 type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
ACDOP11_33_14
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9428..10192)
DNA (765bp) protein (255aa)
methionine aminopeptidase
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=2 to=251 evalue=3.4e-79 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=1 to=249 evalue=1.6e-67 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=1 to=251 evalue=3.9e-65 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
ACDOP11_33_15
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10189..10731)
DNA (543bp) protein (181aa)
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Nocardioides sp. JS614 RepID=KAD_NOCSJ (db=UNIREF evalue=1.0e-17 bit_score=92.4 identity=30.81 coverage=96.1325966850829)
seg (db=Seg db_id=seg from=124 to=141)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=179 evalue=4.2e-37)
ACDOP11_33_16
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(10728..11294)
DNA (567bp) protein (189aa)
Adenylate kinase n=1 Tax=Methanocella paludicola SANAE RepID=D1Z0U5_METPS (db=UNIREF evalue=5.0e-35 bit_score=150.0 identity=35.38 coverage=92.5925925925926)
adenylate kinase
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=89 to=100 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=9 to=182 evalue=8.6e-50 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
ACDOP11_33_17
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(11275..12561)
DNA (1287bp) protein (429aa)
preprotein translocase subunit SecY
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
transmembrane_regions (db=TMHMM db_id=tmhmm from=393 to=411)
transmembrane_regions (db=TMHMM db_id=tmhmm from=361 to=383)
ACDOP11_33_18
GWA1_OP11_39_32_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(12561..13004)
DNA (444bp) protein (148aa)
50S ribosomal protein L15
50S ribosomal protein L15 n=2 Tax=Anaerococcus RepID=C7REG3_ANAPD (db=UNIREF evalue=2.0e-12 bit_score=74.7 identity=43.69 coverage=66.2162162162162)
seg (db=Seg db_id=seg from=18 to=40)
RIBOSOMAL_L15 (db=PatternScan db_id=PS00475 from=112 to=141 evalue=0.0 interpro_id=IPR001196 interpro_description=Ribosomal protein L15, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_19
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria

Not on your lists


comp(13001..13492)
DNA (492bp) protein (164aa)
30S ribosomal protein S5
seg (db=Seg db_id=seg from=108 to=126)
seg (db=Seg db_id=seg from=41 to=59)
RIBOSOMAL S SUBUNIT (db=HMMPanther db_id=PTHR13718 from=1 to=153 evalue=7.7e-49 interpro_id=IPR000851 interpro_description=Ribosomal protein S5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_20
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(13492..13824)
DNA (333bp) protein (111aa)
50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CJV7_ROBBH (db=UNIREF evalue=8.0e-22 bit_score=105.0 identity=56.12 coverage=85.5855855855856)
seg (db=Seg db_id=seg from=2 to=13)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=2 to=110 evalue=1.3e-33 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_21
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(13824..14375)
DNA (552bp) protein (184aa)
50S ribosomal protein L6
seg (db=Seg db_id=seg from=168 to=183)
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=153 to=161 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=175 evalue=4.1e-86 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACDOP11_33_22
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(14386..14778)
DNA (393bp) protein (131aa)
rpsH; 30S ribosomal protein S8
seg (db=Seg db_id=seg from=45 to=57)
coiled-coil (db=Coil db_id=coil from=48 to=69 evalue=NA)
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=7 to=130 evalue=1.0e-33 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_23
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(14978..15517)
DNA (540bp) protein (180aa)
50S ribosomal protein L5
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=179 evalue=5.2e-80)
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=179 evalue=5.2e-80 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein, L5p/L5a/L11e/organellar L5 types (db=HMMPIR db_id=PIRSF002161 from=1 to=179 evalue=1.1e-77 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_24
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(15521..15826)
DNA (306bp) protein (102aa)
50S ribosomal protein L24
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=101 evalue=3.6e-28 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=2 to=100 evalue=1.0e-25 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=1 to=101 evalue=8.5e-21 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_25
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria

Not on your lists


comp(15831..16205)
DNA (375bp) protein (125aa)
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=RL14_RUBXD (db=UNIREF evalue=1.0e-35 bit_score=151.0 identity=60.16 coverage=96.0)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=124 evalue=1.6e-56 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S RIBOSOMAL PROTEIN L14 (db=HMMPanther db_id=PTHR11761:SF3 from=1 to=123 evalue=2.2e-50 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACDOP11_33_26
GWB1_OP11_36_18_partial, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(16202..16435)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=28 to=41)
RIBOSOMAL_S17 (db=PatternScan db_id=PS00056 from=52 to=64 evalue=0.0 interpro_id=IPR019979 interpro_description=Ribosomal protein S17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=1 to=72 evalue=4.8e-30 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER (db=HMMPanther db_id=PTHR10744 from=1 to=77 evalue=1.9e-23 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_27
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(16432..16650)
DNA (219bp) protein (73aa)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=7 to=63 evalue=1.6e-10 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=4 to=69 evalue=3.8e-10 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=8 to=63 evalue=2.3e-06 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.10.287.310 from=1 to=70 evalue=0.00031 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACDOP11_33_28
R_OP11_Levybacteria_37_11, Levybacteria, Microgenomates, Bacteria

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comp(16647..17063)
DNA (417bp) protein (139aa)
rplP; 50S ribosomal protein L16
RIBOSOMAL_L16_2 (db=PatternScan db_id=PS00701 from=82 to=93 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=7.3e-73 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
50S/60S RIBOSOMAL PROTEIN L16 (db=HMMPanther db_id=PTHR12220:SF11 from=1 to=137 evalue=7.3e-56)
ACDOP11_33_29
GWA2_OP11_var_36_13, Levybacteria, Microgenomates, Bacteria

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comp(17067..17711)
DNA (645bp) protein (215aa)
30S ribosomal protein S3
30S ribosomal protein S3 n=2 Tax=Anaerococcus RepID=C7REH6_ANAPD (db=UNIREF evalue=2.0e-45 bit_score=185.0 identity=48.13 coverage=95.8139534883721)
seg (db=Seg db_id=seg from=162 to=173)
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=213 evalue=1.8e-57 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACDOP11_33_30
Microgenomates bacterium GW2011_GWC1_38_14, Microgenomates, Bacteria

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comp(17711..18049)
DNA (339bp) protein (113aa)
rplV; 50S ribosomal protein L22
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=5 to=108 evalue=1.6e-29 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=110 evalue=1.5e-28 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.90.470.10 from=1 to=108 evalue=9.0e-26 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying items 1-30 of 35 in total

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