Alias: ACDOP11_10843.21105.23
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACDOP11_40_1
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3..305)
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phenylalanyl-tRNA synthetase subunit beta
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=3 to=80 evalue=5.8e-14 interpro_id=IPR009061 interpro_description=Putative DNA binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated
Phenylalanine--tRNA ligase beta subunit alias=gwa2_scaffold_51_94 id=5084236 tax=GWA2_OP11 species=Oribacterium sinus genus=Oribacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
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ACDOP11_40_2
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(402..1430)
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hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=8 to=342 evalue=1.4e-96)
pheS: phenylalanyl-tRNA synthetase, alpha su (db=HMMTigr db_id=TIGR00468 from=38 to=342 evalue=3.2e-83 interpro_id=IPR004529 interpro_description=Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: phenylalanyl-tRNA aminoacylati
tRNA-synt_2d (db=HMMPfam db_id=PF01409 from=88 to=342 evalue=2.3e-76 interpro_id=IPR002319 interpro_description=Phenylalanyl-tRNA synthetase alpha chain GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: phenylalanyl-tRNA aminoacylation (GO:0006432))
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ACDOP11_40_3
GWC1_OP11_43_13, Microgenomates, Bacteria
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Not on your lists |
comp(1579..1935)
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rplT; 50S ribosomal protein L20
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=111 evalue=2.1e-39 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_L20 (db=HMMPfam db_id=PF00453 from=1 to=106 evalue=5.1e-36 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
RIBOSOMALL20 (db=FPrintScan db_id=PR00062 from=9 to=38 evalue=1.3e-30 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACDOP11_40_4
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1940..2167)
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L35p-like (db=superfamily db_id=SSF143034 from=2 to=65 evalue=2.0e-10)
Ribosomal_L35p (db=HMMPfam db_id=PF01632 from=3 to=60 evalue=3.7e-08 interpro_id=IPR021137 interpro_description=Ribosomal protein L35 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL35 (db=FPrintScan db_id=PR00064 from=3 to=20 evalue=1.2e-06 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL35 (db=FPrintScan db_id=PR00064 from=36 to=54 evalue=1.2e-06 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACDOP11_40_5
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2148..2723)
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translation initiation factor IF-3
infC: translation initiation factor IF-3 (db=HMMTigr db_id=TIGR00168 from=10 to=173 evalue=2.9e-47 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
TRANSLATION INITIATION FACTOR IF-3 (db=HMMPanther db_id=PTHR10938 from=25 to=172 evalue=1.8e-33 interpro_id=IPR001288 interpro_description=Translation initiation factor 3 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
IF3_N (db=HMMPfam db_id=PF05198 from=13 to=79 evalue=5.3e-24 interpro_id=IPR019814 interpro_description=Translation initiation factor 3, N-terminal GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
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ACDOP11_40_6
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2776..4485)
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threonyl-tRNA synthetase
threonyl-tRNA synthetase
Threonyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDN7_THET1 (db=UNIREF evalue=4.0e-161 bit_score=572.0 identity=51.59 coverage=98.0701754385965)
seg (db=Seg db_id=seg from=381 to=392)
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ACDOP11_40_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(4701..6512)
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GTP-binding protein TypA
seg (db=Seg db_id=seg from=121 to=132)
TypA_BipA: GTP-binding protein TypA/BipA (db=HMMTigr db_id=TIGR01394 from=3 to=596 evalue=0.0 interpro_id=IPR006298 interpro_description=GTP-binding protein TypA GO=Molecular Function: GTP binding (GO:0005525), Cellular Component: intracellular (GO:0005622))
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=43 to=58 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
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ACDOP11_40_8
RBG_16_OP11_Woesebacteria_42_24_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(6571..7053)
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excinuclease ABC subunit C
GIY-YIG (db=HMMPfam db_id=PF01541 from=83 to=151 evalue=3.0e-10 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=82 to=147 evalue=9.8e-09 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
excinuclease ABC subunit C Tax=RBG_16_OP11_Woesebacteria_42_24_curated
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ACDOP11_40_9
ACD13, ACD13, ACD13, ACD13, Microgenomates, Bacteria
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Not on your lists |
comp(7081..7887)
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uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] (db=KEGG evalue=3.0e-63 bit_score=245.0 identity=50.37 coverage=93.6802973977695)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=219 to=241)
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ACDOP11_40_10
GWA2_OP11, GWA2_OP11, GWA2_OP11, GWA2_OP11, Microgenomates, Bacteria
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Not on your lists |
comp(8509..8736)
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Transglycosylas (db=HMMPfam db_id=PF06737 from=3 to=73 evalue=2.0e-06 interpro_id=IPR010618 interpro_description=Transglycosylase-like GO=Cellular Component: extracellular region (GO:0005576))
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ACDOP11_40_11
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria
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Not on your lists |
comp(8860..9369)
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hypothetical protein
NUDIX_BOX (db=PatternScan db_id=PS00893 from=71 to=92 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=6 to=163 evalue=6.2e-38 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=7 to=169 evalue=2.3e-26 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
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ACDOP11_40_12
unknown
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Not on your lists |
comp(9465..10052)
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This feature has no annotations |
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ACDOP11_40_13
unknown
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Not on your lists |
comp(10062..10556)
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This feature has no annotations |
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ACDOP11_40_14
unknown
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Not on your lists |
comp(10549..11217)
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This feature has no annotations |
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ACDOP11_40_15
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria
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Not on your lists |
comp(11214..12380)
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hypothetical protein
seg (db=Seg db_id=seg from=225 to=238)
DUF43 (db=HMMPfam db_id=PF01861 from=114 to=336 evalue=4.4e-55 interpro_id=IPR002723 interpro_description=Protein of unknown function DUF43)
Uncharacterized protein {ECO:0000313|EMBL:BAL80691.1}; TaxID=511051 species="Bacteria; Caldiserica; Caldisericia; Caldisericales; Caldisericaceae; Caldisericum.;" source="Caldisericum exile (strain DS
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ACDOP11_40_16
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(12364..13329)
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radical SAM protein
Radical SAM domain protein n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZY5_GEOSF (db=UNIREF evalue=3.0e-29 bit_score=132.0 identity=27.45 coverage=85.7142857142857)
coiled-coil (db=Coil db_id=coil from=285 to=306 evalue=NA)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=7 to=228 evalue=5.0e-29)
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ACDOP11_40_17
GWB1_OP11_41_15, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13373..13756)
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speH; S-adenosylmethionine decarboxylase (EC:4.1.1.50)
AdoMet_dc (db=HMMPfam db_id=PF02675 from=29 to=122 evalue=1.6e-19 interpro_id=IPR003826 interpro_description=S-adenosylmethionine decarboxylase, bacterial/archaeal GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
no description (db=Gene3D db_id=G3DSA:3.60.90.10 from=17 to=127 evalue=2.0e-15 interpro_id=IPR016067 interpro_description=S-adenosylmethionine decarboxylase, core GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
S-adenosylmethionine decarboxylase (db=superfamily db_id=SSF56276 from=18 to=116 evalue=2.5e-15 interpro_id=IPR016067 interpro_description=S-adenosylmethionine decarboxylase, core GO=Molecular Function: adenosylmethionine decarboxylase activity (GO:0004014), Biological Process: spermidine biosynthetic process (GO:0008295))
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ACDOP11_40_18
GWD2_OP11_40_19, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13782..14411)
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Tax=GWD2_OP11_40_19
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ACDOP11_40_19
GWB1_OP11_40_12_partial, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(14425..15300)
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trigger factor
seg (db=Seg db_id=seg from=26 to=44)
seg (db=Seg db_id=seg from=184 to=200)
Trigger factor ribosome-binding domain (db=superfamily db_id=SSF102735 from=5 to=134 evalue=3.4e-26 interpro_id=IPR008881 interpro_description=Trigger factor, ribosome-binding, bacterial GO=Biological Process: protein folding (GO:0006457), Biological Process: protein transport (GO:0015031))
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ACDOP11_40_20
ACD13, ACD13, ACD13, ACD13, Microgenomates, Bacteria
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Not on your lists |
comp(15669..15929)
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RNP-1 like RNA-binding protein (db=KEGG evalue=2.0e-18 bit_score=94.7 identity=56.47 coverage=96.551724137931)
RIBONUCLEOPROTEIN, CHLOROPLAST (db=HMMPanther db_id=PTHR10432:SF56 from=3 to=85 evalue=1.5e-31)
RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432 from=3 to=85 evalue=1.5e-31)
no description (db=HMMSmart db_id=SM00360 from=4 to=77 evalue=1.8e-26 interpro_id=IPR000504 interpro_description=RNA recognition motif, RNP-1 GO=Molecular Function: nucleic acid binding (GO:0003676))
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ACDOP11_40_21
GWD1_OP11_41_12, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(16075..17091)
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peptidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=98 to=316 evalue=2.4e-26)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=97 to=336 evalue=2.4e-15)
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ACDOP11_40_22
ACD40, ACD40, ACD40, ACD40, Microgenomates, Bacteria
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Not on your lists |
comp(17185..17415)
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This feature has no annotations |
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ACDOP11_40_23
ACD24, ACD24, ACD24, ACD24, WWE3, Bacteria
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Not on your lists |
comp(17405..18652)
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DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] (db=KEGG evalue=3.0e-52 bit_score=209.0 identity=33.66 coverage=95.1923076923077)
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=8 to=245 evalue=6.9e-61)
DNA POLYMERASE IV / KAPPA (db=HMMPanther db_id=PTHR11076:SF12 from=12 to=379 evalue=9.3e-60)
DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR11076 from=12 to=379 evalue=9.3e-60 interpro_id=IPR001126 interpro_description=DNA-repair protein, UmuC-like GO=Molecular Function: damaged DNA binding (GO:0003684), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA repair (GO:0006281))
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ACDOP11_40_24
GWD1_OP11_41_12, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(18641..19138)
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hypothetical protein
Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QU38_CHRSD (db=UNIREF evalue=2.0e-14 bit_score=81.6 identity=35.88 coverage=77.1084337349398)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
seg (db=Seg db_id=seg from=101 to=114)
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ACDOP11_40_25
GWB1_OP11_40_12_partial, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(19383..19904)
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PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:KKR43799.1}; TaxID=1618576 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_40_12.;"
hypothetical protein
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ACDOP11_40_26
RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(20070..20753)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions 12..34 Tax=RIFOXYB1_FULL_OP11_Woesebacteria_41_13_curated
hypothetical protein
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ACDOP11_40_27
unknown
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Not on your lists |
comp(20900..21145)
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seg (db=Seg db_id=seg from=27 to=42)
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