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ACDOP11_48

Alias: ACDOP11_6751.10030.27

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACDOP11_48_1
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria

Not on your lists

comp(3..842)
DNA (840bp) protein (280aa)
hypothetical protein (db=KEGG evalue=3.0e-12 bit_score=75.9 identity=28.49 coverage=63.2142857142857)
seg (db=Seg db_id=seg from=170 to=181)
seg (db=Seg db_id=seg from=84 to=99)
seg (db=Seg db_id=seg from=21 to=34)
ACDOP11_48_2
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria

Not on your lists

comp(846..2162)
DNA (1317bp) protein (439aa)
hypothetical protein (db=KEGG evalue=7.0e-63 bit_score=244.0 identity=42.91 coverage=65.1480637813212)
rimK_rel_E_lig: alpha-L-glutamate liga (db=HMMTigr db_id=TIGR02291 from=2 to=307 evalue=7.0e-75 interpro_id=IPR011758 interpro_description=Alpha-L-glutamate ligase-related protein)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=30 to=293 evalue=3.8e-15)
DUF785 (db=HMMPfam db_id=PF05618 from=325 to=435 evalue=9.7e-07 interpro_id=IPR008503 interpro_description=Protein of unknown function DUF785)
ACDOP11_48_3
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria

Not on your lists

comp(2170..3081)
DNA (912bp) protein (304aa)
alpha-L-glutamate ligase, RimK family; K05844 ribosomal protein S6 modification protein (db=KEGG evalue=2.0e-10 bit_score=69.7 identity=27.12 coverage=91.4473684210526)
seg (db=Seg db_id=seg from=236 to=254)
seg (db=Seg db_id=seg from=158 to=173)
coiled-coil (db=Coil db_id=coil from=155 to=176 evalue=NA)
ACDOP11_48_4
ACD61, ACD61, ACD61, ACD61, Microgenomates, Bacteria

Not on your lists

comp(3086..4012)
DNA (927bp) protein (309aa)
ribosomal protein S6 modification protein; K05844 ribosomal protein S6 modification protein (db=KEGG evalue=3.0e-10 bit_score=69.7 identity=25.4 coverage=91.2621359223301)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=116 to=308 evalue=9.9e-21)
RimK (db=HMMPfam db_id=PF08443 from=156 to=307 evalue=7.9e-14 interpro_id=IPR013651 interpro_description=ATP-grasp fold, RimK-type)
Alpha-L-glutamate ligase, RimK family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT07_9BACT alias=ACD61_24830.19977.11G0019,ACD61_24830.19977.11_19,ACD61_C00038G00019 id=91747 tax=ACD61 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
ACDOP11_48_5
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(4035..4442)
DNA (408bp) protein (136aa)

This feature has no annotations

ACDOP11_48_6
unknown

Not on your lists

comp(4475..4642)
DNA (168bp) protein (56aa)
seg (db=Seg db_id=seg from=21 to=39)
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA)
ACDOP11_48_7
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(4675..5892)
DNA (1218bp) protein (406aa)
Hypothetical protein CBG10865 (db=KEGG evalue=6.0e-25 bit_score=118.0 identity=26.63 coverage=92.3645320197044)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=350 to=369)
ACDOP11_48_8
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(6027..6599)
DNA (573bp) protein (191aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=88)
TPR-like (db=superfamily db_id=SSF48452 from=107 to=188 evalue=1.2e-09)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=106 to=188 evalue=3.9e-07 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
ACDOP11_48_9
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(6609..7712)
DNA (1104bp) protein (368aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] (db=KEGG evalue=2.0e-64 bit_score=249.0 identity=41.62 coverage=90.4891304347826)
seg (db=Seg db_id=seg from=5 to=18)
trmU: tRNA (5-methylaminomethyl-2-thiouridyl (db=HMMTigr db_id=TIGR00420 from=2 to=366 evalue=3.7e-125 interpro_id=IPR004506 interpro_description=tRNA-specific 2-thiouridylase GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA processing (GO:0008033), Molecular Function: transferase activity (GO:0016740))
tRNA_Me_trans (db=HMMPfam db_id=PF03054 from=2 to=366 evalue=3.6e-109)
ACDOP11_48_16S_1
unknown

Not on your lists

7971..8619
DNA (649bp)
ACDOP11_48_10
RAAC19, RAAC19, RAAC19, RAAC19, Microgenomates, Bacteria

Not on your lists

comp(9248..9958)
DNA (711bp) protein (237aa)
cob-i1; COB-i1 protein (db=KEGG evalue=3.0e-11 bit_score=72.0 identity=28.5 coverage=75.9493670886076)
Homing endonucleases (db=superfamily db_id=SSF55608 from=10 to=204 evalue=1.5e-41)
LAGLIDADG_2 (db=HMMPfam db_id=PF03161 from=22 to=181 evalue=5.0e-34 interpro_id=IPR004860 interpro_description=LAGLIDADG DNA endonuclease GO=Molecular Function: endonuclease activity (GO:0004519))
no description (db=Gene3D db_id=G3DSA:3.10.28.10 from=110 to=204 evalue=3.9e-18)
Displaying 11 items

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